RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 TSSK3Q96PN8 268 aa17.53■□□□□ 0.4
PHRF1-205ENST00000533464 CCDC28BQ9BUN5 200 aa17.53■□□□□ 0.4
PHRF1-205ENST00000533464 C6orf62Q9GZU0 229 aaPredicted RBP17.53■□□□□ 0.4
PHRF1-205ENST00000533464 RHBGQ9H310 441 aa17.53■□□□□ 0.4
PHRF1-205ENST00000533464 CST1P01037 141 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 CDH4P55283 916 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 ZNF460Q14592 562 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 PLPP4Q5VZY2 271 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 VN1R5Q7Z5H4 357 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 PIGWQ7Z7B1 504 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 FETUBQ9UGM5 382 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 TLL1O43897 1013 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 MAPKAPK2P49137 400 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 CXCR3P49682 368 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 ST13P50502 369 aaKnown RBP17.52■□□□□ 0.4
PHRF1-205ENST00000533464 LPCAT4Q643R3 524 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 CERS6Q6ZMG9 384 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 RINLQ6ZS11 566 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 ACAT2Q9BWD1 397 aa17.52■□□□□ 0.4
PHRF1-205ENST00000533464 DENND2DQ9H6A0 471 aaPredicted RBP17.52■□□□□ 0.4
PHRF1-205ENST00000533464 EOMESO95936 686 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 NRG1Q02297 640 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-205ENST00000533464 PRKCZQ05513 592 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 SULT2A1Q06520 285 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 RALGDSQ12967 914 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 GSTA3Q16772 222 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 CHPFQ8IZ52 775 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 DPP10Q8N608 796 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 NELL1Q92832 810 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 HOPXQ9BPY8 73 aaPredicted RBP17.52■□□□□ 0.39
PHRF1-205ENST00000533464 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.39
PHRF1-205ENST00000533464 ACAP2Q15057 778 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 CLHC1Q8NHS4 586 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 TWIST2Q8WVJ9 160 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 NMUR1Q9HB89 426 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 PIGVQ9NUD9 493 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 CDH22Q9UJ99 828 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 PSMD13Q9UNM6 376 aa17.52■□□□□ 0.39
PHRF1-205ENST00000533464 GRM6O15303 877 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 STBD1O95210 358 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ITPKAP23677 461 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CHRNA4P43681 627 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 KRR1Q13601 381 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 NPAS4Q8IUM7 802 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 GLIS1Q8NBF1 620 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ASZ1Q8WWH4 475 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CLP1Q92989 425 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CLIC5Q9NZA1 410 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 BBIP1A8MTZ0 92 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 INSIG1O15503 277 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 PAICSP22234 425 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ARMCX4Q5H9R4 360 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF697Q5TEC3 545 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 BCO2Q9BYV7 579 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 TCEA3O75764 348 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 GOT2P00505 430 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 IL10RBQ08334 325 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CCDC157Q569K6 752 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 TAPT1Q6NXT6 567 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CRTC3Q6UUV7 619 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ZC3H3Q8IXZ2 948 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 OFCC1Q8IZS5 231 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 MPP5Q8N3R9 675 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 CPSF7Q8N684 471 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 HEXDCQ8WVB3 486 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 NTAN1Q96AB6 310 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 OSBPL6Q9BZF3 934 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 S100A14Q9HCY8 104 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 A0A088AWK7 358 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 IRAK2O43187 625 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 SNAP91O60641 907 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 ZNF10P21506 573 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 RPL5P46777 297 aaKnown RBP17.51■□□□□ 0.39
PHRF1-205ENST00000533464 PPM1MQ96MI6 270 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 KCTD5Q9NXV2 234 aa17.51■□□□□ 0.39
PHRF1-205ENST00000533464 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 TRIM24O15164 1050 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 PRAMEF1O95521 474 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 CNPP09543 421 aaKnown RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 GNPDA1P46926 289 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 ATP1A4Q13733 1029 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 PRSS55Q6UWB4 352 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 ITCHQ96J02 903 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 OSBPL11Q9BXB4 747 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 TNKS2Q9H2K2 1166 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 MYL12AP19105 171 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 INAQ16352 499 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 REXO5Q96IC2 774 aaKnown RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 EPB41L4BQ9H329 900 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 ZC4H2Q9NQZ6 224 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 GPSM3Q9Y4H4 160 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 COPG1Q9Y678 874 aaKnown RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 TIPRLO75663 272 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 NR1H2P55055 460 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 CACNG1Q06432 222 aa17.5■□□□□ 0.39
PHRF1-205ENST00000533464 TSNQ15631 228 aaKnown RBP17.5■□□□□ 0.39
PHRF1-205ENST00000533464 LSM12Q3MHD2 195 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms