RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 STT3AP46977 705 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 GSK3BP49841 420 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 POLR2JP52435 117 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 RBM20Q5T481 1227 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 NIPAL1Q6NVV3 410 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 OR7A2PQ8NGA2 310 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FCRL2Q96LA5 508 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 MFSD1Q9H3U5 465 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 TIMM13Q9Y5L4 95 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 EVPLQ92817 2033 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FAM72CH0Y354 149 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CD3EAPO15446 510 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 HCRTO43612 131 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CNOT3O75175 753 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 PAX3P23760 479 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 RGS4P49798 205 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 HLCSP50747 726 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CCR3P51677 355 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 RAB39AQ14964 217 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 POLD3Q15054 466 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 ZNF678Q5SXM1 525 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FAM72AQ5TYM5 149 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 IL31Q6EBC2 164 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FAM72DQ6L9T8 149 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FAM72BQ86X60 149 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 PGAP3Q96FM1 320 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 EGFL8Q99944 293 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 TFB2MQ9H5Q4 396 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 PIF1Q9H611 641 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 OLAHQ9NV23 265 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 USE1Q9NZ43 259 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 A0A1W2PP18 115 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 C17orf102A2RUQ5 167 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 NRP1O14786 923 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 KCNH1O95259 989 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 NPPAP01160 153 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CYBBP04839 570 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CDH1P12830 882 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 BDNFP23560 247 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 LEPRP48357 1165 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 CD97P48960 835 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CLK1P49759 484 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 CLCQ05315 142 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 GRIK2Q13002 908 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 DAG1Q14118 895 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 ATP6AP1Q15904 470 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 PPP1R3AQ16821 1122 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 TIGD2Q4W5G0 525 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 GPRIN3Q6ZVF9 776 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 OSTM1Q86WC4 334 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FIG4Q92562 907 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 MYLPFQ96A32 169 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 RDH12Q96NR8 316 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CHID1Q9BWS9 393 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 DGCR6LQ9BY27 220 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 TRNAU1APQ9NX07 287 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 GIN1Q9NXP7 522 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 EBF1Q9UH73 591 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 ZNHIT2Q9UHR6 403 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 SARDHQ9UL12 918 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 FNDC3AQ9Y2H6 1198 aaKnown RBP9.38□□□□□ -0.91
BDNF-216ENST00000532997 IPPQ9Y573 584 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 SNX10Q9Y5X0 201 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CITO14578 2027 aa9.38□□□□□ -0.91
BDNF-216ENST00000532997 CCDC162PA2VCL2 907 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 RAMP2O60895 175 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 RECQL5O94762 991 aaPredicted RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 UROSP10746 265 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 HDCP19113 662 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 CHRM3P20309 590 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 PCSK6P29122 969 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 RPL9P32969 192 aaKnown RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 IL5RAQ01344 420 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 BNIP3Q12983 259 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 CRTC3Q6UUV7 619 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 SLC15A3Q8IY34 581 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 PELI3Q8N2H9 469 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 RTL3Q8N8U3 475 aaKnown RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 BPIFB6Q8NFQ5 453 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 METTL6Q8TCB7 284 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 TRUB1Q8WWH5 349 aaKnown RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 MYRFLQ96LU7 910 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 UHRF1Q96T88 793 aaPredicted RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 LRRC3Q9BY71 257 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 ZNF385DQ9H6B1 395 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 TNPO3Q9Y5L0 923 aaKnown RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 SLC30A1Q9Y6M5 507 aa9.37□□□□□ -0.91
BDNF-216ENST00000532997 A0A0G2JLL6 359 aaPredicted RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 NCF1BA6NI72 391 aaPredicted RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 NCF1CA8MVU1 366 aaPredicted RBP9.37□□□□□ -0.91
BDNF-216ENST00000532997 BTN3A1O00481 513 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms