RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 IRAK4Q9NWZ3 460 aa6.05□□□□□ -1.44
CPNE3-206ENST00000523469 LMO7Q8WWI1 1683 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TNRC6CQ9HCJ0 1690 aaKnown RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 LRRC53A6NM62 1247 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 LACTBL1A8MY62 500 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 WNT9BO14905 357 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TIMM23O14925 209 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 BCAT2O15382 392 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 SERPINI2O75830 405 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 HOXB5P09067 269 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 ACAA1P09110 424 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 T-ENOLP0DO92 83 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 GPTP24298 496 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 C21orf33P30042 268 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 LTBQ06643 244 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TYW3Q6IPR3 259 aaKnown RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 ATF7IPQ6VMQ6 1270 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TDRPQ86YL5 185 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TEX19Q8NA77 164 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 NEXN-AS1Q8NBZ9 246 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 METTL6Q8TCB7 284 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 TXNDC15Q96J42 360 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 MPP4Q96JB8 637 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 LRFN5Q96NI6 719 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 HIPK2Q9H2X6 1198 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 MAGEE1Q9HCI5 957 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 CISD1Q9NZ45 108 aaKnown RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 LSM4Q9Y4Z0 139 aaKnown RBP6.04□□□□□ -1.44
CPNE3-206ENST00000523469 ITSN1Q15811 1721 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 PKD1L3Q7Z443 1732 aa6.04□□□□□ -1.44
CPNE3-206ENST00000523469 DYTNA2CJ06 578 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 B4E171 279 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 USP17L23D6RBM5 183 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 J3KR12 359 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 SEC14L5O43304 696 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 TMEM63AO94886 807 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 MMP2P08253 660 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 SHMT1P34896 483 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 TSPAN7P41732 249 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 CCR9P51686 369 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 NEDD9Q14511 834 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 SHFQ7M4L6 423 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 FJX1Q86VR8 437 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 CLIP4Q8N3C7 705 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 SCCPDHQ8NBX0 429 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 BEST2Q8NFU1 509 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 C7orf26Q96N11 449 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 ZNF570Q96NI8 536 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 PCDHB16Q9NRJ7 776 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 NUP155O75694 1391 aa6.03□□□□□ -1.44
CPNE3-206ENST00000523469 UTYO14607 1347 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 CRB1P82279 1406 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 ANKARQ7Z5J8 1434 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 KCNJ13O60928 360 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 SEC14L2O76054 403 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 SEC31AO94979 1220 aaKnown RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 MBD4O95243 580 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 CH25HO95992 272 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 CCKARP32238 428 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 PIGAP37287 484 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 DDX10Q13206 875 aaKnown RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 PLCB4Q15147 1175 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 SGO1Q5FBB7 561 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 CDC73Q6P1J9 531 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 LINGO2Q7L985 606 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 SPATA2LQ8IUW3 424 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 DIS3L2Q8IYB7 885 aaKnown RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 NEUROG1Q92886 237 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 ABHD8Q96I13 439 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 DDX4Q9NQI0 724 aaKnown RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 TRPM1Q7Z4N2 1603 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 CICQ96RK0 1608 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-206ENST00000523469 ANKRD30BQ9BXX2 1392 aa6.02□□□□□ -1.45
CPNE3-206ENST00000523469 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 HSPA12AO43301 675 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 CD4P01730 458 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 CDAP32320 146 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 RPL7AP62424 266 aaKnown RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 ZXDBP98169 803 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 ERV3-1Q14264 604 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 HLFQ16534 295 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 TSTQ16762 297 aaKnown RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 LCTLQ6UWM7 567 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 SLC35F3Q8IY50 421 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 AGBL3Q8NEM8 1001 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 PABPC5Q96DU9 382 aaKnown RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 SLITRK1Q96PX8 696 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 RANBP17Q9H2T7 1088 aaKnown RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 SELENONQ9NZV5 590 aa6.01□□□□□ -1.45
CPNE3-206ENST00000523469 BRD4O60885 1362 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 COL5A2P05997 1499 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-206ENST00000523469 BCL9O00512 1426 aa6□□□□□ -1.45
CPNE3-206ENST00000523469 A0A0U1RQJ8 604 aa6□□□□□ -1.45
CPNE3-206ENST00000523469 LINC01553A4QN01 128 aa6□□□□□ -1.45
CPNE3-206ENST00000523469 NPIPB15A6NHN6 443 aaPredicted RBP6□□□□□ -1.45
CPNE3-206ENST00000523469 TBX18O95935 607 aa6□□□□□ -1.45
CPNE3-206ENST00000523469 RARSP54136 660 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms