RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C1QTNF1Q9BXJ1 281 aa4.52□□□□□ -1.69
SQLE-202ENST00000518604 SEZ6LQ9BYH1 1024 aa4.52□□□□□ -1.69
SQLE-202ENST00000518604 ZNF215Q9UL58 517 aaPredicted RBP4.52□□□□□ -1.69
SQLE-202ENST00000518604 ACSL5Q9ULC5 683 aa4.52□□□□□ -1.69
SQLE-202ENST00000518604 IGLV5-52A0A0A0MRZ9 124 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 PRSS47A8MTI9 375 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 VCYO14598 125 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 HS6ST1O60243 411 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 SRPRAP08240 638 aaKnown RBP4.51□□□□□ -1.69
SQLE-202ENST00000518604 IGHV4-30-4P0DP06 118 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 G6PDP11413 515 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 SRCP12931 536 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 MCM3P25205 808 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 TAS2R40P59535 323 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
SQLE-202ENST00000518604 CSNK2A1P68400 391 aaPredicted RBP4.51□□□□□ -1.69
SQLE-202ENST00000518604 ACSM2AQ08AH3 577 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 CHAF1BQ13112 559 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 WTAPQ15007 396 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 FRG2Q64ET8 278 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 ACSM2BQ68CK6 577 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 HIST2H2BCQ6DN03 193 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 HIST2H2BDQ6DRA6 164 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 KCTD18Q6PI47 426 aaPredicted RBP4.51□□□□□ -1.69
SQLE-202ENST00000518604 TSPAN33Q86UF1 283 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 FJX1Q86VR8 437 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 TMTC2Q8N394 836 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 CSNK2A3Q8NEV1 391 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 WASF1Q92558 559 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 ZBTB9Q96C00 473 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 LYZL4Q96KX0 146 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 OR2A14Q96R47 310 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 MAK16Q9BXY0 300 aaKnown RBP4.51□□□□□ -1.69
SQLE-202ENST00000518604 SIL1Q9H173 461 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 SLC28A3Q9HAS3 691 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 PCDH9Q9HC56 1237 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 TERF2IPQ9NYB0 399 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 TBC1D29Q9UFV1 150 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 FBXW11Q9UKB1 542 aa4.51□□□□□ -1.69
SQLE-202ENST00000518604 ZNF644Q9H582 1327 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 TTC3P53804 2025 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 KANSL1LA0AUZ9 987 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 PROB1E7EW31 1015 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 PLRG1O43660 514 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 NDUFS7O75251 213 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 RB1P06400 928 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 LDHCP07864 332 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 CLTBP09497 229 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 CSH1P0DML2 217 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 CSH2P0DML3 217 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 GABRB1P18505 474 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 EIF2S3P41091 472 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 GARSP41250 739 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 CDKN2AP42771 156 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 CAMPP49913 170 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 PEX5P50542 639 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 CLCN3P51790 818 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 GALCP54803 685 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 HNRNPH2P55795 449 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 NLRP5P59047 1200 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 ASTE1Q2TB18 679 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 EIF2S3LQ2VIR3 472 aaKnown RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 RAB41Q5JT25 222 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 KRBA2Q6ZNG9 492 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 EPHX4Q8IUS5 362 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 ZKSCAN4Q969J2 545 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 MTBPQ96DY7 904 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 ACSS1Q9NUB1 689 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 MCM9Q9NXL9 1143 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 OGFRQ9NZT2 677 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 SUCLA2Q9P2R7 463 aaPredicted RBP4.5□□□□□ -1.69
SQLE-202ENST00000518604 COPG2Q9UBF2 871 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 SLC9A2Q9UBY0 812 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 FBXL17Q9UF56 701 aa4.5□□□□□ -1.69
SQLE-202ENST00000518604 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 C1orf226A1L170 272 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 LINC01553A4QN01 128 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 BTBD18B2RXH4 712 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 GPC4O75487 556 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 NTN1O95631 604 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 ALPLP05186 524 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 SNHG28P0DPA3 235 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 LMO1P25800 156 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 BDKRB2P30411 391 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 BNC1Q01954 994 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 LTBQ06643 244 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 FOXM1Q08050 763 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 TRAF3Q13114 568 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 OASLQ15646 514 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 CALCRLQ16602 461 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 CTF1Q16619 201 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 DECR1Q16698 335 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 PNLIPRP3Q17RR3 467 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 ATP13A5Q4VNC0 1218 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 DCST1Q5T197 706 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 SLC36A4Q6YBV0 504 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 CFAP77Q6ZQR2 320 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms