RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TNPO3Q9Y5L0 923 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 GMPPBQ9Y5P6 360 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 NEMP2A6NFY4 417 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF99A8MXY4 864 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PIP5K1BO14986 540 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 LSM1O15116 133 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 STX7O15400 261 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 CDH1P12830 882 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF182P17025 639 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 HALP42357 657 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 CACNB2Q08289 660 aaPredicted RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 LCP2Q13094 533 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PCBP1Q15365 356 aaKnown RBP eCLIP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF549Q6P9A3 640 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 IL27RAQ6UWB1 636 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 GPRIN3Q6ZVF9 776 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 CARM1Q86X55 608 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 GPSM1Q86YR5 675 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 HIPK1Q86Z02 1210 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM86AQ8N2M4 240 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 OR2T12Q8NG77 320 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PIWIL1Q96J94 861 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF347Q96SE7 839 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 SLC39A3Q9BRY0 314 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 MEAF6Q9HAF1 191 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PTPRHQ9HD43 1115 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 PCDHGA7Q9Y5G6 932 aa6.65□□□□□ -1.34
CPNE3-203ENST00000517490 TNRC6CQ9HCJ0 1690 aaKnown RBP6.65□□□□□ -1.34
CPNE3-203ENST00000517490 KIF13BQ9NQT8 1826 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 LAMB2P55268 1798 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 C9IYK1 514 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 SOCS2O14508 198 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 RGS14O43566 566 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 NCK1P16333 377 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MAGEA3P43357 314 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 YAP1P46937 504 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MRPL28Q13084 256 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 GK3PQ14409 553 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 GPR158Q5T848 1215 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 Q6ZNX1 250 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MAVSQ7Z434 540 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 HEATR4Q86WZ0 1026 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM132CQ8N3T6 1108 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 ZFYVE19Q96K21 471 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 PPP3R2Q96LZ3 170 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 COLEC11Q9BWP8 271 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 CDC14AQ9UNH5 594 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 BTBD3Q9Y2F9 522 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TCAF2A6NFQ2 919 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TAF4O00268 1085 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 RGS5O15539 181 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DNAJB5O75953 348 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MT-ND1P03886 318 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 SPATA31D3P0C874 917 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 KRT20P35900 424 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 ALDH3B2P48448 385 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TPTEP56180 551 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 INHBEP58166 350 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 HERVK_113P63132 956 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 SP2Q02086 613 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MAPKAPK3Q16644 382 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TIMM50Q3ZCQ8 353 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM53Q6P2H8 277 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 SPATA31D4Q6ZUB0 917 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DCP1BQ8IZD4 617 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 STX19Q8N4C7 294 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TFAP2CQ92754 450 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 HNRNPABQ99729 332 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 TBCDQ9BTW9 1192 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 ERVK-6Q9BXR3 956 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 NUSAP1Q9BXS6 441 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DPEP3Q9H4B8 488 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 DNAJB9Q9UBS3 223 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF214Q9UL59 606 aaPredicted RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF510Q9Y2H8 683 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 FAM32AQ9Y421 112 aaKnown RBP6.65□□□□□ -1.35
CPNE3-203ENST00000517490 MFHAS1Q9Y4C4 1052 aa6.65□□□□□ -1.35
CPNE3-203ENST00000517490 H3BMQ9 156 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 BCKDKO14874 412 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SERPINF2P08697 491 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MTHFD1P11586 935 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 IL4RP24394 825 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 HTR7P34969 479 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 CD86P42081 329 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 RXRGP48443 463 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 GSK3BP49841 420 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ATP6AP1Q15904 470 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 THOC7Q6I9Y2 204 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 ZC3H7AQ8IWR0 971 aaKnown RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 LILRA2Q8N149 483 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 EFHBQ8N7U6 833 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM102Q8N9M5 508 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-203ENST00000517490 MFSD2AQ8NA29 543 aa6.64□□□□□ -1.35
CPNE3-203ENST00000517490 SPATA22Q8NHS9 363 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms