RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 LRMDAQ9H2I8 198 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 NDST4Q9H3R1 872 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TTC12Q9H892 705 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 KAT14Q9H8E8 782 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TCP11L1Q9NUJ3 509 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 THEGQ9P2T0 379 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HDAC6Q9UBN7 1215 aa0.94□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TDRD15B5MCY1 1934 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PTPRCP08575 1304 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PCNX3Q9H6A9 2034 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 IGKV6-21A0A0C4DH24 114 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A18PA6NE21 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A16PA6NEW6 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A9PA6NNJ1 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A5PA8MXJ8 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 KLRF2D3W0D1 207 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 H0YIN7 160 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ASNA1O43681 348 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PI15O43692 258 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A15PP0C7V4 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM90A14PP0C7W9 464 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TRIM27P14373 513 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 CSF2RAP15509 400 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ITIH1P19827 911 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 UBA1P22314 1058 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ITGA3P26006 1051 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PIK3R1P27986 724 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 DDIT3P35638 169 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 AHRP35869 848 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MVDP53602 400 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HNRNPH2P55795 449 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 RPL24P83731 157 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FOXM1Q08050 763 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PDCLQ13371 301 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 THOC5Q13769 683 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 DCTN1Q14203 1278 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MPEG1Q2M385 716 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TRIM60Q495X7 471 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 LRRC24Q50LG9 513 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 C2CD6Q53TS8 623 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ADAMTSL4-AS1Q5T5F5 129 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 WLSQ5T9L3 541 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 METTL2BQ6P1Q9 378 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MFSD6Q6ZSS7 791 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TBC1D1Q86TI0 1168 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MAP7D3Q8IWC1 876 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 CHERPQ8IWX8 916 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 KIAA2013Q8IYS2 634 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ZBED8Q8IZ13 594 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ADSSL1Q8N142 457 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MYO1HQ8N1T3 1032 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PARP8Q8N3A8 854 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ZNF611Q8N823 705 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 DNAAF4Q8WXU2 420 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 SH3KBP1Q96B97 665 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 METTL2AQ96IZ6 378 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PSD2Q9BQI7 771 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 CLSTN3Q9BQT9 956 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HAUS8Q9BT25 410 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 BRINP2Q9C0B6 783 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 UPF3AQ9H1J1 476 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 P2RY12Q9H244 342 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 PLEKHA4Q9H4M7 779 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 BPIFA1Q9NP55 256 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 GPR108Q9NPR9 543 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 MARCH4Q9P2E8 410 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 LRWD1Q9UFC0 647 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 LIMA1Q9UHB6 759 aaKnown RBP0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TUBE1Q9UJT0 475 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TINAGQ9UJW2 476 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 LZTS1Q9Y250 596 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 CARD8Q9Y2G2 431 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 A3GALT2U3KPV4 340 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 DISP3Q9P2K9 1392 aa0.93□□□□□ -2.26
RNU6-1258P-201ENST00000516911 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 A0A087WW49 117 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 A0A0U1RQF3 1178 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HSPB2A8KAH6 182 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 EIF3DO15371 548 aaKnown RBP eCLIP0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ANP32CO43423 234 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TRMUO75648 421 aaKnown RBP0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ACTL6BO94805 426 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 SCGB1D2O95969 90 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 CLPTM1O96005 669 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 FAM157CP0CG43 387 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ACP5P13686 325 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ETFAP13804 333 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 ANXA7P20073 488 aaKnown RBP0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 TNFSF4P23510 183 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 EIF2S3P41091 472 aaKnown RBP0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HNF4AP41235 474 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 SNX16P57768 344 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 AP2B1P63010 937 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 IGBP1P78318 339 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 SPOCK1Q08629 439 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 COX10Q12887 443 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HNRNPDQ14103 355 aaKnown RBP0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 KIR2DS3Q14952 304 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 HSPB2Q16082 182 aa0.92□□□□□ -2.26
RNU6-1258P-201ENST00000516911 GALNTL6Q49A17 601 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms