RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 OVCA2Q8WZ82 227 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 PMM1Q92871 262 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 ARSGQ96EG1 525 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 AHCYL2Q96HN2 611 aaKnown RBP-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 SMC6Q96SB8 1091 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 HOXD1Q9GZZ0 328 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 ADNPQ9H2P0 1102 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 TUBB1Q9H4B7 451 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 IFT22Q9H7X7 185 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 SARS2Q9NP81 518 aaKnown RBP-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 HPSEQ9Y251 543 aa-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 RAI1Q7Z5J4 1906 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-542P-201ENST00000516405 A0A0U1RQS6 177 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TRIM49BA6NDI0 452 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 C5orf60A6NFR6 353 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TRIM75PA6NK02 468 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 AQP7P3A6NL99 342 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 RHPN2P1A8MT19 583 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 AKR1B15C9JRZ8 316 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ANKRD63C9JTQ0 380 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 RAB27BO00194 218 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 HNRNPRO43390 633 aaKnown RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 SNAI2O43623 268 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 AP1G1O43747 822 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 KBTBD11O94819 623 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 IPO7O95373 1038 aaKnown RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TGDSO95455 350 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 LARGE1O95461 756 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ASMTLO95671 621 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 PSG2P11465 335 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 LIFP15018 202 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF14P17017 642 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 VAMP1P23763 118 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 GIFP27352 417 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 CSTF2P33240 577 aaKnown RBP eCLIP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 MASP1P48740 699 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 LIG4P49917 911 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TMEM50BP56557 158 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 FCHO2Q0JRZ9 810 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TEAD2Q15562 447 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TAZQ16635 292 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 UAP1L1Q3KQV9 507 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 C9orf129Q5T035 196 aaKnown RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 WLSQ5T9L3 541 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 THEMIS2Q5TEJ8 643 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 PLAG1Q6DJT9 500 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 RGMBQ6NW40 437 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF544Q6NX49 715 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 MFSD7Q6UXD7 560 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 B3GNT6Q6ZMB0 384 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF783Q6ZMS7 281 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 SLC16A9Q7RTY1 509 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZSCAN2Q7Z7L9 614 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 MICU3Q86XE3 530 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 CALHM3Q86XJ0 350 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 KMT2EQ8IZD2 1858 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ADSSL1Q8N142 457 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 MYCT1Q8N699 235 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZNF433Q8N7K0 673 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 OR2T11Q8NH01 316 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 PLBD2Q8NHP8 589 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 TBC1D22AQ8WUA7 517 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAR1Q8WVX9 515 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ELSPBP1Q96BH3 223 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAM227BQ96M60 508 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 DGCR6LQ9BY27 220 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 FAM83DQ9H4H8 585 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 CERS4Q9HA82 394 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 AS3MTQ9HBK9 375 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ZBTB20Q9HC78 741 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 SPHK2Q9NRA0 654 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 SERINC1Q9NRX5 453 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 SIRPGQ9P1W8 387 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 ARMCX3Q9UH62 379 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 POLG2Q9UHN1 485 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 HERC5Q9UII4 1024 aaKnown RBP-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 GTF3C4Q9UKN8 822 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 RIPK3Q9Y572 518 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 PCDHB7Q9Y5E2 793 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 CHD4Q14839 1912 aa-0.85□□□□□ -2.55
RNU6-542P-201ENST00000516405 C11orf97A0A1B0GVM6 126 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 EIF3DO15371 548 aaKnown RBP eCLIP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CA11O75493 328 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 PRDM1O75626 825 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 GJB3O75712 270 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CDC123O75794 336 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 RASSF9O75901 435 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 DDAH2O95865 285 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 NPR1P16066 1061 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 TPH1P17752 444 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 GNAZP19086 355 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CYP2A7P20853 494 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ARCN1P48444 511 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CACNB3P54284 484 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 GSDMDP57764 484 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 SEC61BP60468 96 aaKnown RBP-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 CREB5Q02930 508 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 EGFEM1PQ0D2K5 195 aa-0.86□□□□□ -2.55
RNU6-542P-201ENST00000516405 ILF2Q12905 390 aaKnown RBP-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms