RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 ZNF839A8K0R7 811 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF891A8MT65 544 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GNAT3A8MTJ3 354 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RNF212BA8MTL3 300 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C17orf100A8MU93 164 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 B4DSR2 109 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KCNJ18B7U540 433 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 E9PSI1 815 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPECC1L-ADORA2AF8WAN1 911 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BLOC1S5-TXNDC5H3BN57 136 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMX2-CTNND1H3BSU7 103 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 H7C1D1 291 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 K7ESF4 209 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 APBB1O00213 710 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NFKBIEO00221 500 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GPR31O00270 319 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ELL2O00472 640 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PSMD14O00487 310 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CLDN5O00501 218 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 WNT9BO14905 357 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZBTB5O15062 677 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SCAMP1O15126 338 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SMAD9O15198 467 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ARHGAP6O43182 974 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GPR39O43194 453 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CTIFO43310 598 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KCNQ2O43526 872 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FRS3O43559 492 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SYNGR3O43761 229 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DUX1O43812 170 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GTPBP6O43824 516 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CD5LO43866 347 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TLR2O60603 784 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TBX19O60806 448 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GAS7O60861 476 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SMPD2O60906 423 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ICOSLGO75144 302 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TMEM127O75204 238 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF253O75346 499 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BCAS1O75363 584 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MTA2O94776 668 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACTL6BO94805 426 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 OR6A2O95222 327 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RAPGEF3O95398 923 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACSL3O95573 720 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DUS4LO95620 317 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GLP2RO95838 553 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MPIG6BO95866 241 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HPP00738 406 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FOSP01100 380 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NPPAP01160 153 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HLA-DQA1P01909 254 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C1QAP02745 245 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C1QBP02746 253 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 AFPP02771 609 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IGLV7-43P04211 117 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KLK1P06870 262 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GPX1P07203 203 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PRSS1P07477 247 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HNRNPCP07910 306 aaKnown RBP eCLIP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HOXC6P09630 235 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM157CP0CG43 387 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM49P0CI25 452 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRIM49CP0CI26 452 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CCDC166P0CW27 439 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 OR12D1P0DN82 309 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ADH5P11766 374 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ODC1P11926 461 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PABPC1P11940 636 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SRCP12931 536 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PEPDP12955 493 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ITGA4P13612 1032 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATP1A3P13637 1013 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC5A1P13866 664 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ETS1P14921 441 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 BRAFP15056 766 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CPN1P15169 458 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GYPEP15421 78 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MUC1P15941 1255 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZSCAN20P17040 1043 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DESP17661 470 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 XBP1P17861 261 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 XRCC1P18887 633 aaPredicted RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CDK11BP21127 795 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KCNA5P22460 613 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IGHV1-2P23083 117 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CPT2P23786 658 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CMA1P23946 247 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CCNE1P24864 410 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MCM3P25205 808 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SRIP30626 198 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 POLR2BP30876 1174 aaKnown RBP-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CHRNB4P30926 498 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CCR7P32248 378 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACVR1BP36896 505 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ARL4AP40617 200 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UBA7P41226 1012 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GLP1RP43220 463 aa-0.74□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RPS9P46781 194 aaKnown RBP-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms