RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 C1orf87Q8N0U7 546 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 ZBTB10Q96DT7 871 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 SH3GL2Q99962 352 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 GLIS2Q9BZE0 524 aaPredicted RBP3.82□□□□□ -1.8
LINC01088-211ENST00000515597 CSTL1Q9H114 145 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 PLEKHA5Q9HAU0 1116 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 MMP25Q9NPA2 562 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 SLC13A4Q9UKG4 626 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 A4GNTQ9UNA3 340 aa3.82□□□□□ -1.8
LINC01088-211ENST00000515597 HOXC11O43248 304 aaPredicted RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 EDIL3O43854 480 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 AMBPP02760 352 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 ATP1A1P05023 1023 aaKnown RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 HOXB5P09067 269 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 FGF5P12034 268 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 USP8P40818 1118 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 FOXD4Q12950 439 aaPredicted RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 CAMK1Q14012 370 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 CCDC6Q16204 474 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 PLA2G4FQ68DD2 849 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 TRNP1Q6NT89 227 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 METTL2BQ6P1Q9 378 aaKnown RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 KCTD18Q6PI47 426 aaPredicted RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 C19orf48Q6RUI8 117 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SLC26A9Q7LBE3 791 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 DSG4Q86SJ6 1040 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SLC9B2Q86UD5 537 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 TDRPQ86YL5 185 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SPATA6LQ8N4H0 392 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 WDSUB1Q8N9V3 476 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 DBF4BQ8NFT6 615 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SLC20A1Q8WUM9 679 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 CDCA5Q96FF9 252 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 METTL2AQ96IZ6 378 aaKnown RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SLC41A2Q96JW4 573 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 FAM110AQ9BQ89 295 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 H2AFJQ9BTM1 129 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 TRMT61BQ9BVS5 477 aaKnown RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 ZNF696Q9H7X3 374 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 FBRSL1Q9HCM7 1045 aaKnown RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 ZNF334Q9HCZ1 680 aaPredicted RBP3.81□□□□□ -1.8
LINC01088-211ENST00000515597 MPP6Q9NZW5 540 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 POU2F3Q9UKI9 436 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 TBX20Q9UMR3 447 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 AMDHD2Q9Y303 409 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 SCINQ9Y6U3 715 aa3.81□□□□□ -1.8
LINC01088-211ENST00000515597 MROH2BQ7Z745 1585 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 IFT140Q96RY7 1462 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 TEX13CA0A0J9YWL9 993 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 A0A1B0GU03 582 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 LILRA5A6NI73 299 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 IFNL4K9M1U5 179 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 POLBP06746 335 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 DDIT3P35638 169 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 IL15P40933 162 aaPredicted RBP3.8□□□□□ -1.8
LINC01088-211ENST00000515597 GPR68Q15743 365 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 PRICKLE4Q2TBC4 344 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 SLC45A4Q5BKX6 768 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 RGMBQ6NW40 437 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 NFE4Q86UQ8 179 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 KMT5CQ86Y97 462 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.8□□□□□ -1.82e-7■■■■■ 278.5
LINC01088-211ENST00000515597 ZNF34Q8IZ26 560 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 ZNF485Q8NCK3 441 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 OR2AK2Q8NG84 335 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 OR13A1Q8NGR1 328 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 ABTB1Q969K4 478 aaPredicted RBP3.8□□□□□ -1.8
LINC01088-211ENST00000515597 KLHL15Q96M94 604 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 TKTL2Q9H0I9 626 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 PPP1R3EQ9H7J1 279 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 GPR108Q9NPR9 543 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 HINT3Q9NQE9 182 aaKnown RBP3.8□□□□□ -1.8
LINC01088-211ENST00000515597 ABCF3Q9NUQ8 709 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 SAGE1Q9NXZ1 904 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 TTC7AQ9ULT0 858 aaPredicted RBP3.8□□□□□ -1.8
LINC01088-211ENST00000515597 GTF2A1LQ9UNN4 478 aa3.8□□□□□ -1.8
LINC01088-211ENST00000515597 CFTRP13569 1480 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 A0A1B0GVY2 172 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 A0A1W2PQM1 296 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 SERINC4A6NH21 518 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 FAM72CH0Y354 149 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 TNPO2O14787 897 aaKnown RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 LDLRAD4O15165 306 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 SEC14L5O43304 696 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 FTCDO95954 541 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 PYGLP06737 847 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 HNRNPA1P09651 372 aaKnown RBP eCLIP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 ZNF883P0CG24 379 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 ITGA2P17301 1181 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 TIMP3P35625 211 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 GGT5P36269 586 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 KRTAP10-3P60369 221 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 RPP30P78346 268 aaKnown RBP3.79□□□□□ -1.8
LINC01088-211ENST00000515597 NAE1Q13564 534 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 BAK1Q16611 211 aa3.79□□□□□ -1.8
LINC01088-211ENST00000515597 FAM72AQ5TYM5 149 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms