RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PTSQ03393 145 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 ZFP36L1Q07352 338 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 DPTQ07507 201 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 TGIF1Q15583 401 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 AMZ1Q400G9 498 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 ALG1LQ6GMV1 187 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 TIGD7Q6NT04 549 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 INO80CQ6PI98 192 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 MARK2Q7KZI7 788 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 C17orf82Q86X59 251 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 LRRC49Q8IUZ0 686 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 PQLC3Q8N755 202 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 KCTD6Q8NC69 237 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 LSM14AQ8ND56 463 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 SNRNP27Q8WVK2 155 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 TTC9Q92623 222 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 FAF2Q96CS3 445 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 AP2M1Q96CW1 435 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 IQCDQ96DY2 449 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 SEMA4CQ9C0C4 833 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 SEMA6CQ9H3T2 930 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 RBM22Q9NW64 420 aaKnown RBP eCLIP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 TRNAU1APQ9NX07 287 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 CHKBQ9Y259 395 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 PCDHGA7Q9Y5G6 932 aa13.27□□□□□ -0.29
PFDN1-206ENST00000514611 PCYT1BQ9Y5K3 369 aaPredicted RBP13.27□□□□□ -0.29
PFDN1-206ENST00000514611 CAPN8A6NHC0 703 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 MATN3O15232 486 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 B4GAT1O43505 415 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 IVLP07476 585 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 TEAD1P28347 426 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 ADCY8P40145 1251 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 ACTR1BP42025 376 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 STC1P52823 247 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 EPHB1P54762 984 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 ACTR1AP61163 376 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 CFHR1Q03591 330 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 NIPAL4Q0D2K0 466 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 SLC10A2Q12908 348 aaPredicted RBP13.26□□□□□ -0.29
PFDN1-206ENST00000514611 C16orf72Q14CZ0 275 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 IFI16Q16666 785 aaKnown RBP13.26□□□□□ -0.29
PFDN1-206ENST00000514611 KIF26BQ2KJY2 2108 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 PHF19Q5T6S3 580 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 ZNF438Q7Z4V0 828 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 NAGSQ8N159 534 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 LPCAT1Q8NF37 534 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 ARRDC2Q8TBH0 407 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 CTNNBL1Q8WYA6 563 aaPredicted RBP13.26□□□□□ -0.29
PFDN1-206ENST00000514611 OR2M4Q96R27 311 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 CDH19Q9H159 772 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 FOXJ2Q9P0K8 574 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 UVRAGQ9P2Y5 699 aa13.26□□□□□ -0.29
PFDN1-206ENST00000514611 FASNP49327 2511 aaKnown RBP13.26□□□□□ -0.29
PFDN1-206ENST00000514611 PRAMEF33A0A0G2JMD5 474 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 INPP4BO15327 924 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 EFSO43281 561 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 PRAMEF10O60809 474 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 CLDN7O95471 211 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 PRLP01236 227 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ZNF30P17039 623 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 CCNCP24863 283 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ALDH4A1P30038 563 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 HNRNPH3P31942 346 aaKnown RBP13.25□□□□□ -0.29
PFDN1-206ENST00000514611 MAPK10P53779 464 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ZBTB17Q13105 803 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 LY6DQ14210 128 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 NR1D2Q14995 579 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 PDK2Q15119 407 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ADAMTSL4Q6UY14 1074 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 CCDC81Q6ZN84 652 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 NDUFAF2Q8N183 169 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 RAPGEF5Q92565 580 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 HDAC11Q96DB2 347 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 SCARF2Q96GP6 870 aaPredicted RBP13.25□□□□□ -0.29
PFDN1-206ENST00000514611 CMKLR1Q99788 373 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 RIOK2Q9BVS4 552 aaKnown RBP13.25□□□□□ -0.29
PFDN1-206ENST00000514611 DTLQ9NZJ0 730 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
PFDN1-206ENST00000514611 C9orf172C9J069 976 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 KCNK1O00180 336 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 PPM1DO15297 605 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 CPNE6O95741 557 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 MMP2P08253 660 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 KRT7P08729 469 aa13.24□□□□□ -0.29
PFDN1-206ENST00000514611 KRT10P13645 584 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms