RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 R3HDM2Q9Y2K5 976 aaKnown RBP5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 TNFRSF18Q9Y5U5 241 aa5.16□□□□□ -1.58
HMGCS1-207ENST00000514610 ARHGEF40Q8TER5 1519 aa5.15□□□□□ -1.58
HMGCS1-207ENST00000514610 A0A0U1RQJ8 604 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 HMGB1P1B2RPK0 211 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 H3BQ06 376 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 K7ENM7 598 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 ATP2A1O14983 1001 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 KCNJ13O60928 360 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 GLUD1P00367 558 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TUBBP07437 444 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CSH1P0DML2 217 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CSH2P0DML3 217 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 DDX5P17844 614 aaKnown RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 ACADLP28330 430 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CDC25AP30304 524 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 ACSL1P33121 698 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 ACTN2P35609 894 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 GLUD2P49448 558 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CAMPP49913 170 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 RAD23BP54727 409 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TAS2R40P59535 323 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 DDR1Q08345 913 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 DSC1Q08554 894 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 PDE1CQ14123 709 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 PLCB4Q15147 1175 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TOMM20Q15388 145 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 NAB2Q15742 525 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TMEM198Q66K66 360 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 BRINP3Q76B58 766 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TSPAN33Q86UF1 283 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CHERPQ8IWX8 916 aaKnown RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 RPAP2Q8IXW5 612 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 RNF168Q8IYW5 571 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 FBXL14Q8N1E6 418 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 BEST3Q8N1M1 668 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 FAM216AQ8WUB2 273 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 PGAM5Q96HS1 289 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 HARBI1Q96MB7 349 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 SH3GL2Q99962 352 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 PIGMQ9H3S5 423 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 SMARCAD1Q9H4L7 1026 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 MTMR10Q9NXD2 777 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 OGFRQ9NZT2 677 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 CWC15Q9P013 229 aaKnown RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 COPG2Q9UBF2 871 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 TTC7AQ9ULT0 858 aaPredicted RBP5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 NENFQ9UMX5 172 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 PCDHGB4Q9UN71 923 aa5.15□□□□□ -1.59
HMGCS1-207ENST00000514610 A0A1W2PQ09 198 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 SRRM3A6NNA2 597 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 CDRT15L2A8MXV6 281 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 EGFP01133 1207 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ACAA1P09110 424 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 IGHV4-30-4P0DP06 118 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 HOXC9P31274 260 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 POLGP54098 1239 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 HNRNPH2P55795 449 aaKnown RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 NANOS2P60321 138 aaKnown RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 PSMC6P62333 389 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ZBED6P86452 979 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ACSM2AQ08AH3 577 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 IKQ13123 557 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 AIMP2Q13155 320 aaKnown RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 NFATC4Q14934 902 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 WTAPQ15007 396 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 PCGF3Q3KNV8 242 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ZSCAN23Q3MJ62 389 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 RILPL1Q5EBL4 403 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 RAB41Q5JT25 222 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ACSM2BQ68CK6 577 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 WDR73Q6P4I2 378 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 C17orf53Q8N3J3 647 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 TMED6Q8WW62 240 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 PHF21BQ96EK2 531 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 KXD1Q9BQD3 176 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 MMTAG2Q9BU76 263 aaKnown RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 CCDC68Q9H2F9 335 aa5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 SUCLA2Q9P2R7 463 aaPredicted RBP5.14□□□□□ -1.59
HMGCS1-207ENST00000514610 SMAD6O43541 496 aaKnown RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 HS6ST1O60243 411 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 TPPPO94811 219 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 KCNK5O95279 499 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 PGM3O95394 542 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 ICAM1P05362 532 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 PDLIM4P50479 330 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 MRPS34P82930 218 aaKnown RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 CHAF1BQ13112 559 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 XKR9Q5GH70 373 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 EFHC1Q5JVL4 640 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 PLEKHS1Q5SXH7 462 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 DUS1LQ6P1R4 473 aaKnown RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 KCTD18Q6PI47 426 aaPredicted RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 CACNA2D4Q7Z3S7 1137 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 SDCCAG8Q86SQ7 713 aaPredicted RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 PCDH20Q8N6Y1 951 aaKnown RBP5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 ZNF114Q8NC26 417 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 OR8K5Q8NH50 307 aa5.13□□□□□ -1.59
HMGCS1-207ENST00000514610 HMGCLL1Q8TB92 370 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms