RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ARHGAP12Q8IWW6 846 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 TP53I13Q8NBR0 393 aaPredicted RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 NETO2Q8NC67 525 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ATL2Q8NHH9 583 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 BTN2A2Q8WVV5 523 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 EXOC2Q96KP1 924 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 APOLD1Q96LR9 279 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 FMO2Q99518 471 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 FRMD8P1Q9BZ68 369 aaPredicted RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 DPH5Q9H2P9 285 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 SUV39H2Q9H5I1 410 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 ZDHHC18Q9NUE0 388 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 WHRNQ9P202 907 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 VPS18Q9P253 973 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 PCSK1NQ9UHG2 260 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 IPO11Q9UI26 975 aaKnown RBP9.9□□□□□ -0.82
CCL28-203ENST00000513525 KLF15Q9UIH9 416 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 CLCA2Q9UQC9 943 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 U3KQA8 63 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 BPTFQ12830 3046 aa9.9□□□□□ -0.82
CCL28-203ENST00000513525 TPP1O14773 563 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 AQP9O43315 295 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 LZTS3O60299 673 aaPredicted RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 MMP20O60882 483 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 TJP3O95049 919 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 KRT1P04264 644 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 JUNDP17535 347 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 PCK1P35558 622 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 PAPOLAP51003 745 aaKnown RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 THOP1P52888 689 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 CAV1Q03135 178 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 IL10RBQ08334 325 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 NSUN2Q08J23 767 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCL28-203ENST00000513525 PTK6Q13882 451 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 DPYSL2Q16555 572 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 CDCP2Q5VXM1 449 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 DRICH1Q6PGQ1 229 aaPredicted RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 MACC1Q6ZN28 852 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 TMC3Q7Z5M5 1100 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 LZTR1Q8N653 840 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 CELF6Q96J87 481 aaKnown RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 ZIM3Q96PE6 472 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 TXLNGYQ9BZA5 131 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 TSPYL1Q9H0U9 437 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 CAAP1Q9H8G2 361 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 GRHL1Q9NZI5 618 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 NCKIPSDQ9NZQ3 722 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 CWC15Q9P013 229 aaKnown RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 ADAM21Q9UKJ8 722 aa9.89□□□□□ -0.83
CCL28-203ENST00000513525 SMG1Q96Q15 3661 aaKnown RBP9.89□□□□□ -0.83
CCL28-203ENST00000513525 CFAP69A5D8W1 941 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 NEBLO76041 1014 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 MT-CO3P00414 261 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ITIH2P19823 946 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 XPAP23025 273 aaPredicted RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 SERPINA4P29622 427 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 HSD17B3P37058 310 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 MMP12P39900 470 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 RPL21P46778 160 aaKnown RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 RGRP47804 291 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 DPYSQ14117 519 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 PPP1R7Q15435 360 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 COL28A1Q2UY09 1125 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 PPP6R3Q5H9R7 873 aaPredicted RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 ERAP2Q6P179 960 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ZDHHC24Q6UX98 284 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 KDM7AQ6ZMT4 941 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 SPOCD1Q6ZMY3 1216 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 SRLQ86TD4 932 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 PHACTR4Q8IZ21 702 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 NPWQ8N729 165 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 BBOF1Q8ND07 529 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 CCHCR1Q8TD31 782 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 C1orf54Q8WWF1 131 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ECHDC3Q96DC8 303 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ZNF599Q96NL3 588 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 WRAP53Q9BUR4 548 aaKnown RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 CINPQ9BW66 212 aaPredicted RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 BOCQ9BWV1 1114 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ATP13A3Q9H7F0 1226 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 ZWILCHQ9H900 591 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 SP110Q9HB58 689 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 PCDH12Q9NPG4 1184 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 PRDM9Q9NQV7 894 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 MBNL1Q9NR56 388 aaKnown RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 SPASTQ9UBP0 616 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 APOBEC3BQ9UH17 382 aaKnown RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 PNMA8BQ9ULN7 279 aaPredicted RBP9.88□□□□□ -0.83
CCL28-203ENST00000513525 ATP8A1Q9Y2Q0 1164 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 SNX24Q9Y343 169 aa9.88□□□□□ -0.83
CCL28-203ENST00000513525 hCG_1818297A0A087WSY0 165 aa9.87□□□□□ -0.83
CCL28-203ENST00000513525 GOLGA6CA6NDK9 693 aa9.87□□□□□ -0.83
CCL28-203ENST00000513525 GOLGA6L10A6NI86 522 aa9.87□□□□□ -0.83
CCL28-203ENST00000513525 LMO7DNF2Z398 122 aa9.87□□□□□ -0.83
CCL28-203ENST00000513525 H3BRJ5 948 aa9.87□□□□□ -0.83
CCL28-203ENST00000513525 NDC80O14777 642 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms