RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 AGBL2Q5U5Z8 902 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 C15orf39Q6ZRI6 1047 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 OCC1Q8TAD7 63 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 ASZ1Q8WWH4 475 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 WFDC12Q8WWY7 111 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 SPSB4Q96A44 273 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 KLHL29Q96CT2 875 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 DAZAP1Q96EP5 407 aaKnown RBP6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 HES6Q96HZ4 224 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLC41A2Q96JW4 573 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 MRGPRX2Q96LB1 330 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 PPP1R36Q96LQ0 422 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 OLAHQ9NV23 265 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRPC4Q9UBN4 977 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 DBF4Q9UBU7 674 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 TSPAN16Q9UKR8 245 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRPC5Q9UL62 973 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 PLEKHA6Q9Y2H5 1048 aa6.3□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A075B6Q4 140 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 C7orf72A4D263 438 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 LRRIQ3A6PVS8 624 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 LGALS8O00214 317 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRAPPC3O43617 180 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 BNIP3LO60238 219 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ECI2O75521 394 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 LY86O95711 162 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CH25HO95992 272 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ASNSP08243 561 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 C8orf89P0DMQ9 161 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 HOXB1P14653 301 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TCF4P15884 667 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CD33P20138 364 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 EDN2P20800 178 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 FGFR3P22607 806 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 NTSR1P30989 418 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PIK3CGP48736 1102 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 RAB32Q13637 225 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TUBA3CQ13748 450 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 NCCRP1Q6ZVX7 275 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CDAN1Q8IWY9 1227 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CADM4Q8NFZ8 388 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 OR6S1Q8NH40 331 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLC26A7Q8TE54 656 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 EDAQ92838 391 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TNFRSF25Q93038 417 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ANKRD27Q96NW4 1050 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 C1QTNF3Q9BXJ4 246 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 NUSAP1Q9BXS6 441 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SUGCTQ9HAC7 445 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CHST7Q9NS84 486 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 DNAJC17Q9NVM6 304 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 RIC8BQ9NVN3 520 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 FKBP14Q9NWM8 211 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 HYPKQ9NX55 129 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 KCNK4Q9NYG8 393 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CGNL1Q0VF96 1302 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 A0A1W2PPM1 405 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 HTR3EA5X5Y0 456 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PRAMEF25A6NGN4 478 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 H3BM21 787 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CYR61O00622 381 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TRDMT1O14717 391 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 GDF9O60383 454 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SEC14L2O76054 403 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 TGM6O95932 706 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SERPING1P05155 500 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CCDC130P13994 396 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 KLRC1P26715 233 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 HOXA6P31267 233 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 HOXA13P31271 388 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 RWDD2BP57060 319 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 OLIG2Q13516 323 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 NPY5RQ15761 445 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CDKAL1Q5VV42 579 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CDC73Q6P1J9 531 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZNF704Q6ZNC4 412 aaPredicted RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ZDHHC21Q8IVQ6 265 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 BBS1Q8NFJ9 593 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PANK1Q8TE04 598 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CFAP57Q96MR6 1250 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PANX1Q96RD7 426 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 COQ7Q99807 217 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 SLC12A9Q9BXP2 914 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CLPBQ9H078 707 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 ECT2Q9H8V3 914 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 FZD10Q9ULW2 581 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PLEKHM1Q9Y4G2 1056 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PCDHB7Q9Y5E2 793 aa6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 CHD2O14647 1828 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-209ENST00000512476 PPIP5K1Q6PFW1 1433 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 TTC34A8MYJ7 566 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 LRRTM2O43300 516 aa6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 C4BPAP04003 597 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-209ENST00000512476 INHBBP09529 407 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms