RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 SOD1P00441 154 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 PAPOLAP51003 745 aaKnown RBP18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 ERV3-1Q14264 604 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 WDR59Q6PJI9 974 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 TRIM74Q86UV6 250 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 SFRP1Q8N474 314 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 DTD2Q96FN9 168 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 ZMYND15Q9H091 742 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 VPS4AQ9UN37 437 aa18.93■□□□□ 0.62
HMGCS1-206ENST00000511774 SCYL2Q6P3W7 929 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 WDR74Q6RFH5 385 aaPredicted RBP18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 Q6ZVL8 140 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 ARHGAP12Q8IWW6 846 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 TP53INP2Q8IXH6 220 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 CPT1CQ8TCG5 803 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 NCSTNQ92542 709 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 AHCYL2Q96HN2 611 aaKnown RBP18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 OR2M4Q96R27 311 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 SLC38A3Q99624 504 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 ZPBPQ9BS86 351 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 TRIM55Q9BYV6 548 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 TRIT1Q9H3H1 467 aaKnown RBP18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 GPATCH2LQ9NWQ4 482 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 KLHL3Q9UH77 587 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 CROTQ9UKG9 612 aa18.92■□□□□ 0.62
HMGCS1-206ENST00000511774 TTLL8A6PVC2 850 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 F8VZ95 297 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 PALMO75781 387 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 CLDN1O95832 211 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 GPD1P21695 349 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 DLSTP36957 453 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 DCTP40126 519 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 SCNN1BP51168 640 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 MAN2A1Q16706 1144 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 PYCR3Q53H96 274 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 RAET1GQ6H3X3 334 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 TSPAN33Q86UF1 283 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 OR10G6Q8NH81 332 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 PCDHB18PQ96TA0 734 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 NDST4Q9H3R1 872 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 CATSPERBQ9H7T0 1116 aa18.91■□□□□ 0.62
HMGCS1-206ENST00000511774 GOLGA6CA6NDK9 693 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 GOLGA6BA6NDN3 693 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 POLR1CO15160 346 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 HTRA2O43464 458 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 RFPL1O75677 317 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 GOLGA6DP0CG33 693 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 KRT3P12035 628 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 UCHL3P15374 230 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 ERCC5P28715 1186 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 VIPR1P32241 457 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 PPM1FP49593 454 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 NDST2P52849 883 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 PMS2P54278 862 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 NFATC2Q13469 925 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 MAP7Q14244 749 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 NADK2Q4G0N4 442 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 PRR30Q53SZ7 412 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 MARK2Q7KZI7 788 aaKnown RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 ESX1Q8N693 406 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 GALNT6Q8NCL4 622 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 SMIM14Q96QK8 99 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 CINPQ9BW66 212 aaPredicted RBP18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 GOLGA6AQ9NYA3 693 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 POLHQ9Y253 713 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 PCDHGC4Q9Y5F7 938 aa18.9■□□□□ 0.62
HMGCS1-206ENST00000511774 TCRBV5S1A1TA0A578 114 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 NPIPB15A6NHN6 443 aaPredicted RBP18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 COPB1P53618 953 aaKnown RBP18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 CA9Q16790 459 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 TECPR1Q7Z6L1 1165 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 NPWQ8N729 165 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 PAF1Q8N7H5 531 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 SPOCK2Q92563 424 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 ULBP3Q9BZM4 244 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 CD84Q9UIB8 345 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 PRKAB1Q9Y478 270 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 MAP4K5Q9Y4K4 846 aa18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 OAS3Q9Y6K5 1087 aaKnown RBP18.89■□□□□ 0.61
HMGCS1-206ENST00000511774 APCP25054 2843 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 CDC14CA4D256 554 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 FGF10O15520 208 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 GADD45BO75293 160 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 GFPT2O94808 682 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 UNGP13051 313 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 POU3F2P20265 443 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 TEAD1P28347 426 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 MAPK9P45984 424 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 GFERP55789 205 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 GSCP56915 257 aaPredicted RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 CDR2Q01850 454 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 HHEXQ03014 270 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 MRPL49Q13405 166 aaKnown RBP18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 VWA3BQ502W6 1294 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 HSP90AA4PQ58FG1 418 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 FAM114A1Q8IWE2 563 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 PGBD5Q8N414 524 aa18.88■□□□□ 0.61
HMGCS1-206ENST00000511774 EFCAB3Q8N7B9 438 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms