RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ATL1Q8WXF7 558 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 SHC3Q92529 594 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 GATA6Q92908 595 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC74AQ96AQ1 378 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 ARRDC3Q96B67 414 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 TEKT5Q96M29 485 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 RUNDC3BQ96NL0 473 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 CAPS2Q9BXY5 557 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 SMOC1Q9H4F8 434 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 SARS2Q9NP81 518 aaKnown RBP2.84□□□□□ -1.96
CLOCK-209ENST00000511124 NMRK1Q9NWW6 199 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 GPR83Q9NYM4 423 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 TAS2R14Q9NYV8 317 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 IFT80Q9P2H3 777 aaPredicted RBP2.84□□□□□ -1.96
CLOCK-209ENST00000511124 NUDT5Q9UKK9 219 aa2.84□□□□□ -1.96
CLOCK-209ENST00000511124 FNDC1Q4ZHG4 1894 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCDC151A5D8V7 595 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PATE3B3GLJ2 98 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KCNJ18B7U540 433 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 AKR1B15C9JRZ8 316 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 E7EQ34 232 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KLRC4-KLRK1H3BQV0 150 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MDM4O15151 490 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 GRID2O43424 1007 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SDC3O75056 442 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RTN2O75298 545 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCNB1P14635 433 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ACSL1P33121 698 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KRT20P35900 424 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PREPP48147 710 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 NR2C2P49116 596 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RAD23BP54727 409 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PPP2CBP62714 309 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RPS24P62847 133 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PPP2CAP67775 309 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CDR2Q01850 454 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RGS1Q08116 209 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ABRQ12979 859 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KCNJ12Q14500 433 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 LBRQ14739 615 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DRAP1Q14919 205 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 NAB2Q15742 525 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CERCAMQ5T4B2 595 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TAF3Q5VWG9 929 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DMRTA1Q5VZB9 504 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SPECC1LQ69YQ0 1117 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CRELD2Q6UXH1 353 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CERS6Q6ZMG9 384 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TFAP2DQ7Z6R9 452 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ABI3BPQ7Z7G0 1075 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CLEC14AQ86T13 490 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM110Q86TL2 294 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 UBE2E3Q969T4 207 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 KCNK16Q96T55 309 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM121Q9BTD3 319 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ULBP3Q9BZM4 244 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 AMBRA1Q9C0C7 1298 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM168Q9H0V1 697 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CLK4Q9HAZ1 481 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DMAC2Q9NW81 257 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMEM248Q9NWD8 314 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 WRAP73Q9P2S5 460 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 STOML2Q9UJZ1 356 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 AP4E1Q9UPM8 1137 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MAPK8IP1Q9UQF2 711 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CCL26Q9Y258 94 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FARSAQ9Y285 508 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SLC5A6Q9Y289 635 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DGKBQ9Y6T7 804 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 LAMA4Q16363 1823 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 NLRC5Q86WI3 1866 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 SSU72P8A0A1W2PR75 194 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ERI2A8K979 691 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 E5RI56 91 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CLDN4O14493 209 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 LEFTY1O75610 366 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TMCC1O94876 653 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ZBTB11O95625 1053 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 TP53P04637 393 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MPOP05164 745 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FGF1P05230 155 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PRLRP16471 622 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 PRKCHP24723 683 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 HOXD9P28356 352 aaPredicted RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 DLSTP36957 453 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 GLRBP48167 497 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CXCR3P49682 368 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ITGA1P56199 1179 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 STX17P56962 302 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 POLR2FP61218 127 aaKnown RBP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ARG2P78540 354 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CDC20Q12834 499 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 RPA4Q13156 261 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 BIKQ13323 160 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 FGFBP1Q14512 234 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 CAMK4Q16566 473 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 GPR33Q49SQ1 333 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.83□□□□□ -1.96
CLOCK-209ENST00000511124 ZRANB3Q5FWF4 1079 aa2.83□□□□□ -1.96
CLOCK-209ENST00000511124 MFSD4BQ5TF39 518 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms