RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	SCAMP1	O15126	338 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	MUSK	O15146	869 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	CLDN3	O15551	220 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	B3GALT2	O43825	422 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	RNASEH2A	O75792	299 aa	Known RBP	7.69	□□□□□ -1.18
CAST-231	ENST00000510245	TUSC2	O75896	110 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	PIAS2	O75928	621 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	GIMD1	P0DJR0	217 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	LIF	P15018	202 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	CD1E	P15812	388 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	MAP2K6	P52564	334 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	PPP2CB	P62714	309 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	PPP2CA	P67775	309 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	GOLGA8F	Q08AF8	430 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	GOLGA8DP	Q0D2H9	430 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	TMEM132D	Q14C87	1099 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	DEFB109B	Q30KR1	87 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	COBLL1	Q53SF7	1204 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	NUGGC	Q68CJ6	796 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	JADE1	Q6IE81	842 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	TCTN3	Q6NUS6	607 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	VSTM1	Q6UX27	236 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	NEK8	Q86SG6	692 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	BLID	Q8IZY5	108 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	PDCL2	Q8N4E4	241 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	RUFY2	Q8WXA3	655 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	WBP2	Q969T9	261 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	RGMA	Q96B86	450 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	RPL10L	Q96L21	214 aa	Known RBP	7.69	□□□□□ -1.18
CAST-231	ENST00000510245	SARG	Q9BW04	601 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	CCSER1	Q9C0I3	900 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	OR10A2	Q9H208	303 aa		7.69	□□□□□ -1.18
CAST-231	ENST00000510245	TP53BP1	Q12888	1972 aa	Predicted RBP	7.69	□□□□□ -1.18
CAST-231	ENST00000510245	NBEAL1	Q6ZS30	2694 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	MYOF	Q9NZM1	2061 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NPEPPSL1	A6NEC2	478 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	TMEM200C	A6NKL6	621 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	KPNA7	A9QM74	516 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PRSS44	E7EML9	344 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	RNASEH1	O60930	286 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NEBL	O76041	1014 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	FTL	P02792	175 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	ITGB3	P05106	788 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	CD99	P14209	185 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	ITIH1	P19827	911 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	BDNF	P23560	247 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	HTR1B	P28222	390 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PCSK1	P29120	753 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	ADRA1B	P35368	520 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	KIR2DL3	P43628	341 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NPTX2	P47972	431 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	COPB1	P53618	953 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	MAPK10	P53779	464 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PEX3	P56589	373 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	SESN2	P58004	480 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	BPIFB4	P59827	614 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NOP14	P78316	857 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	CDC20	Q12834	499 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	HLTF	Q14527	1009 aa	Known RBP eCLIP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NUMA1	Q14980	2115 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	BMT2	Q1RMZ1	405 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	RNF151	Q2KHN1	245 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	C20orf194	Q5TEA3	1177 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	HTR3D	Q70Z44	454 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	LIMS2	Q7Z4I7	341 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PRPF39	Q86UA1	669 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	DRC7	Q8IY82	874 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	CCDC13	Q8IYE1	715 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PQLC1	Q8N2U9	271 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	ANKRD53	Q8N9V6	530 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	FAM156A	Q8NDB6	213 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NAT6	Q93015	286 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	TMX3	Q96JJ7	454 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	ZNF560	Q96MR9	790 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	DMRTA2	Q96SC8	542 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PKMYT1	Q99640	499 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NAP1L4	Q99733	375 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	OMD	Q99983	421 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	NEUROG2	Q9H2A3	272 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PRSS16	Q9NQE7	514 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	KMT5A	Q9NQR1	393 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	SH3GLB2	Q9NR46	395 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	KLHL11	Q9NVR0	708 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	SERGEF	Q9UGK8	458 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PCDHA12	Q9UN75	941 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	PLA2G4C	Q9UP65	541 aa		7.68	□□□□□ -1.18
CAST-231	ENST00000510245	CFAP20	Q9Y6A4	193 aa	Known RBP	7.68	□□□□□ -1.18
CAST-231	ENST00000510245	EME2	A4GXA9	379 aa	Predicted RBP	7.67	□□□□□ -1.18
CAST-231	ENST00000510245		K7EM74	188 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	NKX2-8	O15522	239 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	TIMM44	O43615	452 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	HUS1	O60921	280 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	ITGA10	O75578	1167 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	ENDOD1	O94919	500 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	AMY1A	P04745	511 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	RHCE	P18577	417 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	FPR1	P21462	350 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	PTGER4	P35408	488 aa		7.67	□□□□□ -1.18
CAST-231	ENST00000510245	RCAN1	P53805	252 aa		7.67	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms