RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 CREB5Q02930 508 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 CEBPZQ03701 1054 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 CHAF1BQ13112 559 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 OLIG2Q13516 323 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 NAE1Q13564 534 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 CTTNQ14247 550 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 HNF4GQ14541 408 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SGO1Q5FBB7 561 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 TYW3Q6IPR3 259 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 NAA16Q6N069 864 aaPredicted RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 PLBD1Q6P4A8 553 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 CRELD2Q6UXH1 353 aaPredicted RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 LINGO2Q7L985 606 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SHFQ7M4L6 423 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 CCDC13Q8IYE1 715 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 FBXL14Q8N1E6 418 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SCFD2Q8WU76 684 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 OIT3Q8WWZ8 545 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 POMGNT1Q8WZA1 660 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 USP6NLQ92738 828 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 ARHGEF2Q92974 986 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 TBC1D31Q96DN5 1066 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 MMABQ96EY8 250 aaPredicted RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 CCDC34Q96HJ3 373 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 JAKMIP1Q96N16 626 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 WDFY2Q96P53 400 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SLITRK1Q96PX8 696 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 MYCBPQ99417 103 aaPredicted RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 NCAPGQ9BPX3 1015 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 TMEM47Q9BQJ4 181 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 EDEM3Q9BZQ6 932 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 DCLK3Q9C098 648 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 FTOQ9C0B1 505 aaKnown RBP eCLIP3.95□□□□□ -1.78
CAST-229ENST00000510098 SIL1Q9H173 461 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SH2D4AQ9H788 454 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 KAT14Q9H8E8 782 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 GRPEL1Q9HAV7 217 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 GPR108Q9NPR9 543 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 DDX4Q9NQI0 724 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 RRP7BPQ9NSQ0 103 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SEPT11Q9NVA2 429 aaKnown RBP3.95□□□□□ -1.78
CAST-229ENST00000510098 HCFC1R1Q9NWW0 138 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 MTRRQ9UBK8 725 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 SLCO3A1Q9UIG8 710 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 MYO6Q9UM54 1294 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 ERVK-11Q9UQG0 969 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 LYVE1Q9Y5Y7 322 aa3.95□□□□□ -1.78
CAST-229ENST00000510098 A0A1B0GVM2 712 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 TMEM202A6NGA9 273 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 MYO1GB0I1T2 1018 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 C19orf81C9J6K1 198 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 AKR1B15C9JRZ8 316 aaPredicted RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 TIMM23O14925 209 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 HTATSF1O43719 755 aaKnown RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 VNN2O95498 520 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 MLYCDO95822 493 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CSH1P0DML2 217 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CSH2P0DML3 217 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 NR2F1P10589 423 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 SCG2P13521 617 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CDH2P19022 906 aaPredicted RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 C21orf33P30042 268 aaPredicted RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 ATP6V1E1P36543 226 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 NNMTP40261 264 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 MSH2P43246 934 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 MC1RQ01726 317 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 MMEL1Q495T6 779 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 KLHL22Q53GT1 634 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 C6orf141Q5SZD1 244 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 GPR139Q6DWJ6 353 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 TMEM154Q6P9G4 183 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 ZNF449Q6P9G9 518 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CASC1Q6TDU7 716 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 QSOX2Q6ZRP7 698 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 HAPLN4Q86UW8 402 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 ARHGAP12Q8IWW6 846 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 AGBL3Q8NEM8 1001 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 APPL2Q8NEU8 664 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 OR8H1Q8NGG4 311 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 OR14A16Q8NHC5 309 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 B4GALNT2Q8NHY0 566 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CCDC47Q96A33 483 aaKnown RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 CALML4Q96GE6 196 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 TXNDC15Q96J42 360 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 TMEM68Q96MH6 324 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 IFIH1Q9BYX4 1025 aaKnown RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 XPO4Q9C0E2 1151 aaKnown RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 OR10A4Q9H209 315 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 NDST4Q9H3R1 872 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 POLR1BQ9H9Y6 1135 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CCDC177Q9NQR7 707 aaPredicted RBP3.94□□□□□ -1.78
CAST-229ENST00000510098 RCOR1Q9UKL0 485 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 TMCC3Q9ULS5 477 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 PCDHGB4Q9UN71 923 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 ADAM18Q9Y3Q7 739 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 CEPT1Q9Y6K0 416 aa3.94□□□□□ -1.78
CAST-229ENST00000510098 GPRASP1Q5JY77 1395 aa3.93□□□□□ -1.78
CAST-229ENST00000510098 CKAP5Q14008 2032 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms