RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 NDST3O95803 873 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CEACAM5P06731 702 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 ETS1P14921 441 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CXCR5P32302 372 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 SPINT3P49223 89 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 HK3P52790 923 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 KIAA1024LP59773 190 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 RPL26P61254 145 aaKnown RBP13.52□□□□□ -0.25
SNF8-206ENST00000509989 HNRNPKP61978 463 aaKnown RBP eCLIP13.52□□□□□ -0.25
SNF8-206ENST00000509989 CDK3Q00526 305 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 RAET1GQ6H3X3 334 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 DOK6Q6PKX4 331 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 GLIS1Q8NBF1 620 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 ADAMTS14Q8WXS8 1223 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 AP2M1Q96CW1 435 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CNTNAP3BQ96NU0 1288 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CDC6Q99741 560 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 FICDQ9BVA6 458 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CNTNAP3Q9BZ76 1288 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 TMEM168Q9H0V1 697 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 GBA3Q9H227 469 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 WDR26Q9H7D7 661 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 CYP4F12Q9HCS2 524 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 KLQ9UEF7 1012 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 FAM153AQ9UHL3 310 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 MOSPD1Q9UJG1 213 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 RPL26L1Q9UNX3 145 aaKnown RBP13.52□□□□□ -0.25
SNF8-206ENST00000509989 ACACBO00763 2458 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 BPTFQ12830 3046 aa13.52□□□□□ -0.25
SNF8-206ENST00000509989 IGF2RP11717 2491 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 C1QTNF9BB2RNN3 333 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 GPR39O43194 453 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 ATP1A1P05023 1023 aaKnown RBP13.51□□□□□ -0.25
SNF8-206ENST00000509989 C1QTNF9P0C862 333 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 MYCLP1P12525 358 aaPredicted RBP13.51□□□□□ -0.25
SNF8-206ENST00000509989 ADRA1AP35348 466 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 GPR1P46091 355 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 DPTQ07507 201 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 SNX1Q13596 522 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 TMC3Q7Z5M5 1100 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 NRROSQ86YC3 692 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 SLC13A5Q86YT5 568 aaPredicted RBP13.51□□□□□ -0.25
SNF8-206ENST00000509989 CDKL3Q8IVW4 592 aaPredicted RBP13.51□□□□□ -0.25
SNF8-206ENST00000509989 TTC30BQ8N4P2 665 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 OR56A4Q8NGH8 313 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 TMEM121Q9BTD3 319 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 FRMD8Q9BZ67 464 aaPredicted RBP13.51□□□□□ -0.25
SNF8-206ENST00000509989 NLGN3Q9NZ94 848 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 PRKAB1Q9Y478 270 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 KCTD3Q9Y597 815 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 KNTC1P50748 2209 aa13.51□□□□□ -0.25
SNF8-206ENST00000509989 PRSS38A1L453 326 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 CACNB4O00305 520 aaPredicted RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 RASGRP1O95267 797 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 ZNF30P17039 623 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 BPIP17213 487 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 AK4P27144 223 aaPredicted RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 SHC2P98077 582 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 FOXK2Q01167 660 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 MSLNQ13421 630 aaPredicted RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 OASLQ15646 514 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 SLC1A5Q15758 541 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SLC14A2Q15849 920 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 KHDC1Q4VXA5 237 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 PERM1Q5SV97 790 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 HENMT1Q5T8I9 393 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 GUSBP11Q6P575 273 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 MARK2Q7KZI7 788 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 TXLNBQ8N3L3 684 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 COX14Q96I36 57 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SPATA13Q96N96 652 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 VAT1Q99536 393 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 ADGRE3Q9BY15 652 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SLC13A1Q9BZW2 595 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 ZFYVE1Q9HBF4 777 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 SMARCAL1Q9NZC9 954 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SIRPGQ9P1W8 387 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SPASTQ9UBP0 616 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 TRHDEQ9UKU6 1024 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 ANGPTL2Q9UKU9 493 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 SUFUQ9UMX1 484 aa13.5□□□□□ -0.25
SNF8-206ENST00000509989 APOBEC2Q9Y235 224 aaKnown RBP13.5□□□□□ -0.25
SNF8-206ENST00000509989 UNC13CQ8NB66 2214 aa13.49□□□□□ -0.25
SNF8-206ENST00000509989 H3BM21 787 aa13.49□□□□□ -0.25
SNF8-206ENST00000509989 TOR1BO14657 336 aa13.49□□□□□ -0.25
SNF8-206ENST00000509989 MTSS1O43312 755 aa13.49□□□□□ -0.25
SNF8-206ENST00000509989 LIASO43766 372 aa13.49□□□□□ -0.25
SNF8-206ENST00000509989 TNFP01375 233 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms