RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 LEPRP48357 1165 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ARCN1P48444 511 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CXCR3P49682 368 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMED10P49755 219 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ATXN1P54253 815 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CDH15P55291 814 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCNK10P57789 538 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TAS2R39P59534 338 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GABARAPL2P60520 117 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 HERVK_113P63132 956 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 RALGDSQ12967 914 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CSHL1Q14406 222 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAB39AQ14964 217 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 NR1D2Q14995 579 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYP51A1Q16850 503 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 C4orf17Q53FE4 359 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TREML2Q5T2D2 321 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TSTD2Q5T7W7 516 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GPR107Q5VW38 600 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TTC23Q5W5X9 447 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 BTBD8Q5XKL5 378 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF470Q6ECI4 717 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 HMBOX1Q6NT76 420 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DUS1LQ6P1R4 473 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CNSTQ6PJW8 725 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CYP2R1Q6VVX0 501 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCTD8Q6ZWB6 473 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 USP51Q70EK9 711 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 LARP4Q71RC2 724 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EEPD1Q7L9B9 569 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CATSPER4Q7RTX7 472 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 LIMS2Q7Z4I7 341 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PTRH1Q86Y79 214 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DDIASQ8IXT1 998 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DCP1BQ8IZD4 617 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SCML4Q8N228 414 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM86AQ8N2M4 240 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CENPSQ8N2Z9 138 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PGBD3Q8N328 593 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CHCHD4Q8N4Q1 142 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SCAIQ8N9R8 606 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 RNF169Q8NCN4 708 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 B3GALNT2Q8NCR0 500 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF555Q8NEP9 628 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 OR13F1Q8NGS4 319 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PPTC7Q8NI37 304 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PEX13Q92968 403 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 HDAC10Q969S8 669 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GTPBP3Q969Y2 492 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EFHD2Q96C19 240 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 LRRC58Q96CX6 371 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 KLRG1Q96E93 195 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ZNF347Q96SE7 839 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 KCTD14Q9BQ13 255 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DCUN1D5Q9BTE7 237 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 FICDQ9BVA6 458 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ERVK-6Q9BXR3 956 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 NUSAP1Q9BXS6 441 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EIF2AQ9BY44 585 aaKnown RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SEZ6LQ9BYH1 1024 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ING2Q9H160 280 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 OSBPL2Q9H1P3 480 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 RAD21L1Q9H4I0 556 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 MROH8Q9H579 483 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 WDCPQ9H6R7 721 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 POPDC3Q9HBV1 291 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 GLOD4Q9HC38 313 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 ANKHQ9HCJ1 492 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 HPS4Q9NQG7 708 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 CHST12Q9NRB3 414 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 IGSF5Q9NSI5 407 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TREX1Q9NSU2 369 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PIGVQ9NUD9 493 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 DDIT4Q9NX09 232 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 COX16Q9P0S2 106 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 TUBGCP4Q9UGJ1 667 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 EBF1Q9UH73 591 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SUN2Q9UH99 717 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAGEL2Q9UJ55 1249 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PSME2Q9UL46 239 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 AP3M1Q9Y2T2 418 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PCDHGA11Q9Y5H2 935 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 SNX5Q9Y5X3 404 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 PTCH2Q9Y6C5 1203 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 NRCAMQ92823 1304 aa4.96□□□□□ -1.62
HMGB3P16-201ENST00000508037 FER1L6Q2WGJ9 1857 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 A0A1W2PP18 115 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 TMEM233B4DJY2 109 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 CLDN25C9JDP6 229 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 NME4O00746 187 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 GABRDO14764 452 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 AZIN1O14977 448 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 AREL1O15033 823 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 MATN3O15232 486 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 MAGEB3O15480 346 aa4.95□□□□□ -1.62
HMGB3P16-201ENST00000508037 TBC1D4O60343 1298 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms