RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 OTUD3Q5T2D3 398 aaPredicted RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 IFNLR1Q8IU57 520 aaPredicted RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 RNF135Q8IUD6 432 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 PIK3C3Q8NEB9 887 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 CHID1Q9BWS9 393 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 SIAEQ9HAT2 523 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 VTA1Q9NP79 307 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 PIGVQ9NUD9 493 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 DNAJC15Q9Y5T4 150 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 OAS3Q9Y6K5 1087 aaKnown RBP17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 NUP205Q92621 2012 aa17.08■□□□□ 0.32
SQSTM1-211ENST00000506690 C9JVG2 144 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 UPK1AO00322 258 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 DNAJB5O75953 348 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ALPLP05186 524 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 TSPAN8P19075 237 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 RCVRNP35243 200 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 GABARAPL2P60520 117 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 POU6F1Q14863 301 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 SF3B4Q15427 424 aaKnown RBP eCLIP17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 INAQ16352 499 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 CRY1Q16526 586 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 RABL3Q5HYI8 236 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 TAF2Q6P1X5 1199 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 PLPPR4Q7Z2D5 763 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 DSG4Q86SJ6 1040 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 IFNEQ86WN2 208 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 CLYBLQ8N0X4 340 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 TRIB2Q92519 343 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 L3HYPDHQ96EM0 354 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 KCTD14Q9BQ13 255 aaPredicted RBP17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 FBXO8Q9NRD0 319 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 SDR39U1Q9NRG7 319 aaPredicted RBP17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 NOX1Q9Y5S8 564 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 MYLKQ15746 1914 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 AURKAO14965 403 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 PSMD3O43242 534 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 CACNG3O60359 315 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 TGFB3P10600 412 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 IL7RP16871 459 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 BDNFP23560 247 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 LIPEQ05469 1076 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 LAMC2Q13753 1193 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 DAG1Q14118 895 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 POLD3Q15054 466 aaPredicted RBP17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ACAP2Q15057 778 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 LY6KQ17RY6 165 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ZNF678Q5SXM1 525 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 ZNF470Q6ECI4 717 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 BLOC1S3Q6QNY0 202 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 KIAA0408Q6ZU52 694 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 SLCO6A1Q86UG4 719 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 RIMKLAQ8IXN7 391 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 BIRC7Q96CA5 298 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 GPR20Q99678 358 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 SLC2A6Q9UGQ3 507 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 FBXO5Q9UKT4 447 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 BAG5Q9UL15 447 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 IFT52Q9Y366 437 aa17.07■□□□□ 0.32
SQSTM1-211ENST00000506690 XYLBO75191 536 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 PRSS23O95084 383 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 JCHAINP01591 159 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 THRBP10828 461 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 EDNRBP24530 442 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 ADRA1BP35368 520 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 HCAR3P49019 387 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 APLP1P51693 650 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 TPTEP56180 551 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 TPI1P60174 286 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 GRB7Q14451 532 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 OTOP3Q7RTS5 596 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 C8orf59Q8N0T1 100 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 DNAJB14Q8TBM8 379 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 SEPHS2Q99611 448 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 DGCR6LQ9BY27 220 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 THG1LQ9NWX6 298 aaKnown RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 GIMAP2Q9UG22 337 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 I6L893 689 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 UBXN8O00124 270 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 SUPT7LO94864 414 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 TCF3P15923 654 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 PTPRAP18433 802 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 ITIH1P19827 911 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 GMPSP49915 693 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 FXNQ16595 210 aa17.06■□□□□ 0.32
SQSTM1-211ENST00000506690 SYPL2Q5VXT5 272 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms