RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CNOT8Q9UFF9 292 aaKnown RBP2.89□□□□□ -1.95
GYPB-207ENST00000506679 SIX4Q9UIU6 781 aa2.89□□□□□ -1.95
GYPB-207ENST00000506679 ACSL5Q9ULC5 683 aa2.89□□□□□ -1.95
GYPB-207ENST00000506679 MAGEA13PA6NCF6 341 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SMTNL1A8MU46 457 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 ZNF587BE7ETH6 402 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SCAMP1O15126 338 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 NKX2-2O95096 273 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 OR2C1O95371 312 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 IPO7O95373 1038 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 AFPP02771 609 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 KRT10P13645 584 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 IL7RP16871 459 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 HOXB6P17509 224 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 RRM1P23921 792 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 MAPK4P31152 587 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 PEX5P50542 639 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 CLCNKAP51800 687 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 ZBED6P86452 979 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 EIF4A2Q14240 407 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 SF3B4Q15427 424 aaKnown RBP eCLIP2.88□□□□□ -1.957e-8■■■■■ 35
GYPB-207ENST00000506679 MED22Q15528 200 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 ADIPOQQ15848 244 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 CTF1Q16619 201 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 DECR1Q16698 335 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 HAUS3Q68CZ6 603 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 CAPRIN2Q6IMN6 1127 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 WDR73Q6P4I2 378 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SLC36A4Q6YBV0 504 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 TSPAN33Q86UF1 283 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SATL1Q86VE3 508 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 CCDC13Q8IYE1 715 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 RNF168Q8IYW5 571 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 BEST3Q8N1M1 668 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 PCDH20Q8N6Y1 951 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 SMRP1Q8NCR6 262 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 TANKQ92844 425 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 RHBDF1Q96CC6 855 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 GRAMD2BQ96HH9 432 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 NAF1Q96HR8 494 aaKnown RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 C3orf30Q96M34 536 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 OR1F2PQ96R84 312 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SEPT5Q99719 369 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 KXD1Q9BQD3 176 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 C1QTNF4Q9BXJ3 329 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 ZHX3Q9H4I2 956 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 MAGIXQ9H6Y5 334 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 SEBOXQ9HB31 216 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 RANGRFQ9HD47 186 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 DIAPH3Q9NSV4 1193 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 ACSS1Q9NUB1 689 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 TMEM30AQ9NV96 361 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 EHD2Q9NZN4 543 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 TTC7AQ9ULT0 858 aaPredicted RBP2.88□□□□□ -1.95
GYPB-207ENST00000506679 SNX9Q9Y5X1 595 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 MAU2Q9Y6X3 613 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 RUSC2Q8N2Y8 1516 aa2.88□□□□□ -1.95
GYPB-207ENST00000506679 AKR1B15C9JRZ8 316 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 SH3BP5O60239 455 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 PTP4A3O75365 173 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 NDUFS3O75489 264 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 DAB1O75553 588 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 WDHD1O75717 1129 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 SLC25A12O75746 678 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 RNASEH2AO75792 299 aaKnown RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 SNRNP70P08621 437 aaKnown RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 ACADMP11310 421 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 S1PR1P21453 382 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 UBA1P22314 1058 aaKnown RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 BDKRB2P30411 391 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 UBA7P41226 1012 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 CLCN3P51790 818 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 GEMIN4P57678 1058 aaKnown RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 CSNK2A1P68400 391 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 SETQ01105 290 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 COASYQ13057 564 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 TNFAIP1Q13829 316 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 KLHL22Q53GT1 634 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 PMS2CLQ68D20 193 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 JADE1Q6IE81 842 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 LCN10Q6JVE6 187 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 BRAT1Q6PJG6 821 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 GLDNQ6ZMI3 551 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 CCNI2Q6ZMN8 369 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 KRBA2Q6ZNG9 492 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 C18orf65Q6ZTR6 163 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 C1orf87Q8N0U7 546 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 SRBD1Q8N5C6 995 aaKnown RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 CSNK2A3Q8NEV1 391 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 OR14L1PQ8NHC6 308 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 LNX1Q8TBB1 728 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 USP6NLQ92738 828 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 MTBPQ96DY7 904 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 C1orf74Q96LT6 269 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 DUX5Q96PT3 197 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 TREX2Q9BQ50 279 aaPredicted RBP2.87□□□□□ -1.95
GYPB-207ENST00000506679 PCGF1Q9BSM1 259 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 KLHL1Q9NR64 748 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 HCFC1R1Q9NWW0 138 aa2.87□□□□□ -1.95
GYPB-207ENST00000506679 UBA2Q9UBT2 640 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms