RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 KIF26BQ2KJY2 2108 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A0A6YYK5 440 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 A0A1W2PQM1 296 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 PSTPIP1O43586 416 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 MPOP05164 745 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 PYGLP06737 847 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 IVLP07476 585 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 PNLIPP16233 465 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ZFXP17010 805 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ACTN2P35609 894 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 CD86P42081 329 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 MAGEA1P43355 309 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 EPHB1P54762 984 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 GABREP78334 506 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 HLTFQ14527 1009 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 SLC14A2Q15849 920 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 QPCTQ16769 361 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 RAET1GQ6H3X3 334 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 CCDC170Q8IYT3 715 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 NRSN1Q8IZ57 195 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 LSMEM2Q8N112 164 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 FAM46DQ8NEK8 389 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 LPCAT1Q8NF37 534 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 AP2M1Q96CW1 435 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 IMP4Q96G21 291 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ATXN7L3BQ96GX2 97 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 PRR11Q96HE9 360 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 MRFAP1L1Q96HT8 127 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 COX14Q96I36 57 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF578Q96N58 590 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 AGAP2Q99490 1192 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 GOLPH3Q9H4A6 298 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 CARS2Q9HA77 564 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 CD84Q9UIB8 345 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 APPL1Q9UKG1 709 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 SUFUQ9UMX1 484 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 TTLL3Q9Y4R7 772 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 ST14Q9Y5Y6 855 aa9.04□□□□□ -0.96
PDLIM5-209ENST00000506632 UNC13CQ8NB66 2214 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ANKRD66B4E2M5 251 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 D6RAR5 112 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PPP1R12AO14974 1030 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SPOPO43791 374 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 CLDN7O95471 211 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 FGF1P05230 155 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 GLB1P16278 677 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ITPKBP27987 946 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ABCG1P45844 678 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 NOP2P46087 812 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 GPR1P46091 355 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 POLD2P49005 469 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 NR2C2P49116 596 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SPINT3P49223 89 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF75DP51815 510 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ERVPABLB-1P60509 514 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 CCL7P80098 99 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ADCY2Q08462 1091 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 AP1B1Q10567 949 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SPIDRQ14159 915 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PRKD1Q15139 912 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 C14orf28Q4W4Y0 310 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 TEX44Q53QW1 395 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 FAM182AQ5T1J6 154 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 C11orf63Q6NUN7 778 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SPOCD1Q6ZMY3 1216 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PDZD3Q86UT5 571 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 RFX6Q8HWS3 928 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 KATNAL2Q8IYT4 538 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 EXD1Q8NHP7 514 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 EID2BQ96D98 161 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 CRELD1Q96HD1 420 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PANX2Q96RD6 677 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 MLPHQ9BV36 600 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 RIOK2Q9BVS4 552 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 MAK16Q9BXY0 300 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 GSDMCQ9BYG8 508 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 CEP41Q9BYV8 373 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 RBSNQ9H1K0 784 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SLC25A51Q9H1U9 297 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SPATS2LQ9NUQ6 558 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 TAAR2Q9P1P5 351 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 CNOT6Q9ULM6 557 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 TFR2Q9UP52 801 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 SATB2Q9UPW6 733 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PCDHGA8Q9Y5G5 932 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
PDLIM5-209ENST00000506632 ATRXP46100 2492 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 hCG_1818297A0A087WSY0 165 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 CCDC187A0A096LP49 1063 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 C1orf232A0A0U1RR37 186 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 PMS2P1A4D2B8 440 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 RGSL1A5PLK6 1076 aa9.02□□□□□ -0.97
PDLIM5-209ENST00000506632 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms