RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SAT1P21673 171 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ELK4P28324 431 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 MATKP42679 507 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ABCG1P45844 678 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 GTF2A2P52657 109 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ACAP2Q15057 778 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SMAD1Q15797 465 aaKnown RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 PPP1R3AQ16821 1122 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 INAVAQ3KP66 663 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 CERCAMQ5T4B2 595 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 PKN3Q6P5Z2 889 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF555Q8NEP9 628 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 LILRB4Q8NHJ6 448 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 HEXDCQ8WVB3 486 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SDCCAG3Q96C92 435 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 KCTD14Q9BQ13 255 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SLC39A3Q9BRY0 314 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 NACA2Q9H009 215 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ACSS2Q9NR19 701 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SACM1LQ9NTJ5 587 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 TBKBP1A7MCY6 615 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF99A8MXY4 864 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 TNPO2O14787 897 aaKnown RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 DCLK1O15075 740 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 NDUFS2O75306 463 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ALPLP05186 524 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 CCDC159P0C7I6 412 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 HOXB6P17509 224 aaKnown RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 NMBRP28336 390 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 IL12AP29459 219 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 AVPR1AP37288 418 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 HCAR3P49019 387 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 BACE1P56817 501 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 NFKB2Q00653 900 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF33AQ06730 810 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SELPLGQ14242 412 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF181Q2M3W8 571 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 C6orf141Q5SZD1 244 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 CHST15Q7LFX5 561 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 LRRC49Q8IUZ0 686 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 LGI2Q8N0V4 545 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 AADATQ8N5Z0 425 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 FAM110BQ8TC76 370 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF566Q969W8 418 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 TMEM125Q96AQ2 219 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ZNF486Q96H40 463 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 ADNPQ9H2P0 1102 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 AS3MTQ9HBK9 375 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
SCLT1-208ENST00000506368 MAGEL2Q9UJ55 1249 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 MGAMO43451 1857 aa15.87■□□□□ 0.13
SCLT1-208ENST00000506368 MYO18AQ92614 2054 aaKnown RBP15.86■□□□□ 0.13
SCLT1-208ENST00000506368 ANKRD34BA5PLL1 514 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 DYRK3O43781 588 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 MRPS14O60783 128 aaKnown RBP15.86■□□□□ 0.13
SCLT1-208ENST00000506368 HTR1BP28222 390 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 KRT6CP48668 564 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 GSK3BP49841 420 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 BCAT1P54687 386 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 OSTNP61366 133 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 TMEM132DQ14C87 1099 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 FSCN1Q16658 493 aaKnown RBP15.86■□□□□ 0.13
SCLT1-208ENST00000506368 PITRM1Q5JRX3 1037 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 ATAD3BQ5T9A4 648 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 DNERQ8NFT8 737 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 OR9I1Q8NGQ6 314 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 HHIPL1Q96JK4 782 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 SLC30A3Q99726 388 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 OMDQ99983 421 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 CEP41Q9BYV8 373 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 SDR39U1Q9NRG7 319 aaPredicted RBP15.86■□□□□ 0.13
SCLT1-208ENST00000506368 IGSF5Q9NSI5 407 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 FAM49BQ9NUQ9 324 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 USE1Q9NZ43 259 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 KCNH4Q9UQ05 1017 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 AAR2Q9Y312 384 aaKnown RBP15.86■□□□□ 0.13
SCLT1-208ENST00000506368 FIS1Q9Y3D6 152 aa15.86■□□□□ 0.13
SCLT1-208ENST00000506368 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 LRRC37A2A6NM11 1700 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 A0A1W2PP18 115 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.85■□□□□ 0.13
SCLT1-208ENST00000506368 TAF4O00268 1085 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 EEF2KO00418 725 aaKnown RBP15.85■□□□□ 0.13
SCLT1-208ENST00000506368 USP12O75317 370 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 LTA4HP09960 611 aaKnown RBP15.85■□□□□ 0.13
SCLT1-208ENST00000506368 STAG3L1P0CL83 205 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 LAMC2Q13753 1193 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 SF3B4Q15427 424 aaKnown RBP eCLIP15.85■□□□□ 0.135e-6■■■■□ 26.7
SCLT1-208ENST00000506368 SLC14A2Q15849 920 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 FAM187BQ17R55 369 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 ADCK1Q86TW2 530 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 DCP2Q8IU60 420 aaKnown RBP15.85■□□□□ 0.13
SCLT1-208ENST00000506368 CEP97Q8IW35 865 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 C2CD4AQ8NCU7 369 aaPredicted RBP15.85■□□□□ 0.13
SCLT1-208ENST00000506368 ZFP90Q8TF47 636 aa15.85■□□□□ 0.13
SCLT1-208ENST00000506368 BRI3BPQ8WY22 251 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms