RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ZBTB11O95625 1053 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 EGFP01133 1207 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE12FP0CL80 117 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE12GP0CL81 117 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE12IP0CL82 117 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SRCP12931 536 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 TM4SF1P30408 202 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 BDKRB2P30411 391 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 PIK3CAP42336 1068 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 PRAMEP78395 509 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE1Q13065 139 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GAGE4Q13068 117 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SF3B4Q15427 424 aaKnown RBP eCLIP4.04□□□□□ -1.761e-6■■■□□ 16.7
TOPBP1-204ENST00000505804 OASLQ15646 514 aaKnown RBP4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 ZSCAN23Q3MJ62 389 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 ATP13A5Q4VNC0 1218 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 FAM205BPQ63HN1 556 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SARM1Q6SZW1 724 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 CREB3L2Q70SY1 520 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 BEST3Q8N1M1 668 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SMRP1Q8NCR6 262 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 WFIKKN2Q8TEU8 576 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GRAMD2BQ96HH9 432 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 TIGD1Q96MW7 591 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 OR1F2PQ96R84 312 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SDF4Q9BRK5 362 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 TM6SF1Q9BZW5 370 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SPRY4Q9C004 299 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 GHITMQ9H3K2 345 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SH2D4AQ9H788 454 aa4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 RSF1Q96T23 1441 aaPredicted RBP4.04□□□□□ -1.76
TOPBP1-204ENST00000505804 A6NCN8 305 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 H3BQ06 376 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 GTPBP1O00178 669 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 SCAMP1O15126 338 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 HCRTR2O43614 444 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 AFPP02771 609 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CLTBP09497 229 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 MCM3P25205 808 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 UBA7P41226 1012 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 DRG2P55039 364 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CDH8P55286 799 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 BRWD1-AS2P59051 145 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CSNK2A1P68400 391 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 KIF5AQ12840 1032 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ZNF155Q12901 538 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 DLG1Q12959 904 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CRYMQ14894 314 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ADIPOQQ15848 244 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CALCRLQ16602 461 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 RGMBQ6NW40 437 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 MZT2BQ6NZ67 158 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 KCTD18Q6PI47 426 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 KRBA2Q6ZNG9 492 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CLEC17AQ6ZS10 378 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 SEPT14Q6ZU15 432 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CHST9Q7L1S5 443 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 MEPCEQ7L2J0 689 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ARMC9Q7Z3E5 817 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CACNA2D4Q7Z3S7 1137 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ADHFE1Q8IWW8 467 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ZNF34Q8IZ26 560 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CSNK2A3Q8NEV1 391 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 OR2AK2Q8NG84 335 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 OR8K5Q8NH50 307 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 HMGCLL1Q8TB92 370 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 TANKQ92844 425 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 APBB2Q92870 758 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 RHBDF1Q96CC6 855 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ORAI1Q96D31 301 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 RTP4Q96DX8 246 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 SEPT5Q99719 369 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 CMKLR1Q99788 373 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 NCAPGQ9BPX3 1015 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 TREX2Q9BQ50 279 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 LTB4R2Q9NPC1 389 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 SETD4Q9NVD3 440 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 HAUS2Q9NVX0 235 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 MAP3K20Q9NYL2 800 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 C1RLQ9NZP8 487 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 MALT1Q9UDY8 824 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ARHGEF40Q8TER5 1519 aa4.03□□□□□ -1.76
TOPBP1-204ENST00000505804 ANKRD18BA2A2Z9 1011 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 M0QZ24 198 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 ATP2A1O14983 1001 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 VILLO15195 856 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 MID1O15344 667 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PPP1R3DO95685 299 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 RRM1P23921 792 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 TKTP29401 623 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 HOXC9P31274 260 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 GARSP41250 739 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 CASP2P42575 452 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 PRCPP42785 496 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 NAP1L1P55209 391 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 FOXM1Q08050 763 aa4.02□□□□□ -1.77
TOPBP1-204ENST00000505804 CDC16Q13042 620 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms