RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF678Q5SXM1 525 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 VWA5B1Q5TIE3 1220 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 TMEM207Q6UWW9 146 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 SPATA6LQ8N4H0 392 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 MAPK15Q8TD08 544 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 STMN2Q93045 179 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 IL17CQ9P0M4 197 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 PRKAG2Q9UGJ0 569 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 SLC30A1Q9Y6M5 507 aa17.23■□□□□ 0.35
TRAPPC11-204ENST00000505676 DENND4CQ5VZ89 1909 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 UBA6A0AVT1 1052 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 RGSL1A5PLK6 1076 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 DCXO43602 365 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 BUD23O43709 281 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 SLC4A1P02730 911 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 COX4I1P13073 169 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 CPOXP36551 454 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZXDBP98169 803 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 DMC1Q14565 340 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 PLEKHG6Q3KR16 790 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 TXNDC11Q6PKC3 985 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 CUZD1Q86UP6 607 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 TCF25Q9BQ70 676 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 TMEM106CQ9BVX2 250 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 GPR63Q9BZJ6 419 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 CEP44Q9C0F1 390 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 ZNF385DQ9H6B1 395 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 MEAF6Q9HAF1 191 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 APPL1Q9UKG1 709 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 FCF1Q9Y324 198 aaKnown RBP17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 PCDHB9Q9Y5E1 797 aa17.22■□□□□ 0.35
TRAPPC11-204ENST00000505676 E9PBE3 544 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 H3BMM5 538 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 KLHL41O60662 606 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 POU2F2P09086 479 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 SERPINA4P29622 427 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 ABL2P42684 1182 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 SNRPD1P62314 119 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 TIAL1Q01085 375 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 FPGSQ05932 587 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 SULT2A1Q06520 285 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 MAPRE2Q15555 327 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 BBS7Q8IWZ6 715 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 ULK2Q8IYT8 1036 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 HS6ST3Q8IZP7 471 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 EFHBQ8N7U6 833 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 KIAA1958Q8N8K9 716 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 SGF29Q96ES7 293 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 NUF2Q9BZD4 464 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 GTSE1Q9NYZ3 720 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 STOML1Q9UBI4 398 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 TRMT6Q9UJA5 497 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 CENPFP49454 3210 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 TCF3P15923 654 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 RPS3P23396 243 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 GCKP35557 465 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 BMPR1AP36894 532 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 CPA2P48052 419 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 LMAN2Q12907 356 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 CDC16Q13042 620 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 PTPRCAPQ14761 206 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 PIM3Q86V86 326 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 CBARPQ8N350 705 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 MRPL43Q8N983 215 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 PIH1D2Q8WWB5 315 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 OR52B2Q96RD2 323 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 ATOH8Q96SQ7 321 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 GSTO2Q9H4Y5 243 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 TBC1D14Q9P2M4 693 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 DPP7Q9UHL4 492 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 FKBPLQ9UIM3 349 aa17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 PRPF19Q9UMS4 504 aaKnown RBP17.21■□□□□ 0.35
TRAPPC11-204ENST00000505676 A0A1W2PRU2 124 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 STX16-NPEPL1H3BU86 382 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 STX16O14662 325 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZBTB14O43829 449 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 FGF4P08620 206 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 HNRNPA1P09651 372 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 SPATA31D3P0C874 917 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PTPN2P17706 415 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PGGT1BP53609 377 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 CRY1Q16526 586 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PTPRNQ16849 979 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 ZRANB3Q5FWF4 1079 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 C16orf89Q6UX73 402 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 SPATA31D4Q6ZUB0 917 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 EFL1Q7Z2Z2 1120 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 OR2AP1Q8NGE2 309 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 OTUB2Q96DC9 234 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 CORO1BQ9BR76 489 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 C1QTNF3Q9BXJ4 246 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 HS3ST2Q9Y278 367 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PTPRSQ13332 1948 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 A0A0J9YYE9 177 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 GRM6O15303 877 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 CCNT2O60583 730 aaKnown RBP17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 TRBC1P01850 177 aa17.2■□□□□ 0.34
TRAPPC11-204ENST00000505676 PIK3R1P27986 724 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms