RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PRLRP16471 622 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADRA2CP18825 462 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NR1D1P20393 614 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 GLDCP23378 1020 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CCNCP24863 283 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 RPL13P26373 211 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 EPHB2P29323 1055 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDC25CP30307 473 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 WNT5AP41221 380 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 STAT6P42226 847 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ASMTP46597 345 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CENPAP49450 140 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CLCN5P51795 746 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CDR1P51861 262 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 GBX2P52951 348 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 MTTPP55157 894 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 RAC3P60763 192 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 TRA2BP62995 288 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 KIF5AQ12840 1032 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 PTPRCAPQ14761 206 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ME3Q16798 604 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ERCC6LQ2NKX8 1250 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPDYE7PQ495Y7 208 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 RNASEH2BQ5TBB1 312 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF787Q6DD87 383 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ANKRD16Q6P6B7 361 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 C16orf87Q6PH81 154 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 C15orf39Q6ZRI6 1047 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 PTCHD4Q6ZW05 846 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARMCX2Q7L311 632 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ZNF551Q7Z340 670 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 TRAPPC11Q7Z392 1133 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARMC9Q7Z3E5 817 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ABI3BPQ7Z7G0 1075 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NEK8Q86SG6 692 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 LDB1Q86U70 411 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ALYREFQ86V81 257 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 RASAL3Q86YV0 1011 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 MAPKAPK5Q8IW41 473 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM219AQ8IW50 185 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SERPINA12Q8IW75 414 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CFAP206Q8IYR0 622 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 KLHL36Q8N4N3 616 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 OR52N2Q8NGI0 321 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 KAT2AQ92830 837 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ST6GALNAC6Q969X2 333 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 FKBP10Q96AY3 582 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 MSI2Q96DH6 328 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CLMNQ96JQ2 1002 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NSMCE2Q96MF7 247 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 KLHL5Q96PQ7 755 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 PRR25Q96S07 402 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NAP1L3Q99457 506 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SEMA3CQ99985 751 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 TMEM47Q9BQJ4 181 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NTPCRQ9BSD7 190 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 C1QTNF5Q9BXJ0 243 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 PUS3Q9BZE2 481 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ANKZF1Q9H8Y5 726 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 AGO3Q9H9G7 860 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 PPANQ9NQ55 473 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 CENPMQ9NSP4 180 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 MBNL3Q9NUK0 354 aaKnown RBP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ATAD3AQ9NVI7 634 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ARL8BQ9NVJ2 186 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ASNSD1Q9NWL6 643 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SOHLH2Q9NX45 425 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SPG21Q9NZD8 308 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 STK26Q9P289 416 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ANKMY1Q9P2S6 941 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 EXTL2Q9UBQ6 330 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 POLLQ9UGP5 575 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 IL17BQ9UHF5 180 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ADAM29Q9UKF5 820 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SLC8A2Q9UPR5 921 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 ICKQ9UPZ9 632 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 NUDCQ9Y266 331 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 C2CD2Q9Y426 696 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 SNX9Q9Y5X1 595 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 FAM205AQ6ZU69 1335 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 FER1L4A9Z1Z3 1794 aa3.66□□□□□ -1.82
HMGB1P22-201ENST00000505315 A0A1W2PS29 197 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CTAGE15A4D2H0 777 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 EME2A4GXA9 379 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CFAP73A6NFT4 308 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCDC188H7C350 402 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 O00370 1275 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 SUV39H1O43463 412 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 B4GALT4O60513 344 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CNTN5O94779 1100 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 RNASE1P07998 156 aaKnown RBP3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 HOXB5P09067 269 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 LINGO3P0C6S8 592 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 CTAGE8P0CG41 777 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 PPP3CBP16298 524 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 IGFBP2P18065 325 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 GATA3P23771 443 aa3.65□□□□□ -1.83
HMGB1P22-201ENST00000505315 PSMA5P28066 241 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms