RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 NFATC4Q14934 902 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 SIX1Q15475 284 aaPredicted RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 OASLQ15646 514 aaKnown RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 PNCKQ6P2M8 343 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 PELI3Q8N2H9 469 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 FAM71DQ8N9W8 422 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 SETD7Q8WTS6 366 aaKnown RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 HPS1Q92902 700 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 FUBP1Q96AE4 644 aaKnown RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 RTP4Q96DX8 246 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 PPP1R2P1Q96PQ5 205 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 TMEM121Q9BTD3 319 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 APOOQ9BUR5 198 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 FSD1LQ9BXM9 530 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 MAGEE1Q9HCI5 957 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 DNAJC28Q9NX36 388 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 TRMT1Q9NXH9 659 aaKnown RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 PNMA8BQ9ULN7 279 aaPredicted RBP11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ZKSCAN5Q9Y2L8 839 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF711Q9Y462 761 aa11.22□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF106Q9H2Y7 1883 aaKnown RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CACNB4O00305 520 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ENC1O14682 589 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 KIF5CO60282 957 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 GCATO75600 419 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 PIAS2O75928 621 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CLDN7O95471 211 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SOD1P00441 154 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 FGGP02679 453 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 FGF1P05230 155 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 HOXC4P09017 264 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 PIRTP0C851 137 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 MYCLP1P12525 358 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 HLA-DPA1P20036 260 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 DGKAP23743 735 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CXCR5P32302 372 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CHRNA4P43681 627 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 TNNT3P45378 269 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 GEMP55040 296 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 HNRNPKP61978 463 aaKnown RBP eCLIP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 BNIP3Q12983 259 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SLC1A5Q15758 541 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ALG11Q2TAA5 492 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF542PQ5EBM4 170 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SIRPB2Q5JXA9 342 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CCDC70Q6NSX1 233 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ARHGEF18Q6ZSZ5 1173 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 RFLNAQ6ZTI6 216 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 GLRX5Q86SX6 157 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 NLRP8Q86W28 1048 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 HEATR4Q86WZ0 1026 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 KLHDC8BQ8IXV7 354 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 PHACTR4Q8IZ21 702 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 NRSN1Q8IZ57 195 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SLC25A45Q8N413 288 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ZNF548Q8NEK5 533 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ATL2Q8NHH9 583 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CCHCR1Q8TD31 782 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 RHBDD1Q8TEB9 315 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 AP2M1Q96CW1 435 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 TBATAQ96M53 351 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 WDR92Q96MX6 357 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CDC6Q99741 560 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 TEX101Q9BY14 249 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ABCG8Q9H221 673 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CAAP1Q9H8G2 361 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ZFYVE1Q9HBF4 777 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 ATP13A2Q9NQ11 1180 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 UCKL1Q9NWZ5 548 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 NFKBIL1Q9UBC1 381 aaPredicted RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 CD84Q9UIB8 345 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 KLF15Q9UIH9 416 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 PYCARDQ9ULZ3 195 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 AAR2Q9Y312 384 aaKnown RBP11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SPO11Q9Y5K1 396 aa11.21□□□□□ -0.61
ERCC8-208ENST00000497892 SPEGQ15772 3267 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 SPAARA0A1B0GVQ0 90 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 RGSL1A5PLK6 1076 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 TMEM202A6NGA9 273 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 CEP104O60308 925 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 ATP1A1P05023 1023 aaKnown RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PYGLP06737 847 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 KELP23276 732 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 ADRA1AP35348 466 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 SPINT3P49223 89 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 DCDC1P59894 354 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PPARDQ03181 441 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PRPSAP1Q14558 356 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 TRIP6Q15654 476 aaKnown RBP11.2□□□□□ -0.62
ERCC8-208ENST00000497892 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
ERCC8-208ENST00000497892 P3H1Q32P28 736 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms