RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	C1QTNF7	Q9BXJ2	289 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ROGDI	Q9GZN7	287 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RANGRF	Q9HD47	186 aa	Predicted RBP	8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PLSCR3	Q9NRY6	295 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CUEDC1	Q9NWM3	386 aa	Predicted RBP	8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	COPZ2	Q9P299	210 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RGPD8	O14715	1765 aa	Predicted RBP	8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	hCG_1818297	A0A087WSY0	165 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549		A0A096LPK6	155 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	BBIP1	A8MTZ0	92 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RPLP0	P05388	317 aa	Known RBP	8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SNX16	P57768	344 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CYP4F8	P98187	520 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CAMK1	Q14012	370 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CCNJ	Q5T5M9	372 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	NAT16	Q8N8M0	369 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	NAT8L	Q8N9F0	302 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ITFG1	Q8TB96	612 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ZFPM2	Q8WW38	1151 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PTER	Q96BW5	349 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	GAL3ST1	Q99999	423 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SH2D3A	Q9BRG2	576 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	DHRS4	Q9BTZ2	278 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	APOL5	Q9BWW9	433 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TOPORS	Q9NS56	1045 aa	Predicted RBP	8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ZNRF3	Q9ULT6	936 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	MAB21L2	Q9Y586	359 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	HRH3	Q9Y5N1	445 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549		U3KQV3	271 aa		8.18	□□□□□ -1.1
CRNKL1-205	ENST00000496549	MN1	Q10571	1320 aa	Predicted RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CASZ1	Q86V15	1759 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549		G3V2T6	193 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PLAT	P00750	562 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TGFB3	P10600	412 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TFEB	P19484	476 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	MAOB	P27338	520 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	HARS2	P49590	506 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	NAGLU	P54802	743 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ERVFC1	P60507	584 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PSMC6	P62333	389 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CREB5	Q02930	508 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SHE	Q5VZ18	495 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	HEATR6	Q6AI08	1181 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SPESP1	Q6UW49	350 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FAM131A	Q6UXB0	335 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RIOX2	Q8IUF8	465 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SCUBE3	Q8IX30	993 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	UBQLNL	Q8IYU4	475 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ZFAND1	Q8TCF1	268 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ST8SIA2	Q92186	375 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ROPN1L	Q96C74	230 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PPIL3	Q9H2H8	161 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	NIPAL2	Q9H841	368 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	BFAR	Q9NZS9	450 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PRELID3B	Q9Y3B1	194 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	C4A	P0C0L4	1744 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	C4B	P0C0L5	1744 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549		A0A0B4J203	849 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ENPP3	O14638	875 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SGCE	O43556	437 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ERN1	O75460	977 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TSPAN19	P0C672	248 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FGF3	P11487	239 aa	Predicted RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	YWHAB	P31946	246 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CACNB3	P54284	484 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	NCS1	P62166	190 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	LGALS3BP	Q08380	585 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	USP10	Q14694	798 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PYDC2	Q56P42	97 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PIK3R6	Q5UE93	754 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FIP1L1	Q6UN15	594 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SPATC1	Q76KD6	591 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SYVN1	Q86TM6	617 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ADHFE1	Q8IWW8	467 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	GLIS1	Q8NBF1	620 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	SLC2A14	Q8TDB8	520 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FAM20A	Q96MK3	541 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TBCB	Q99426	244 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RBM4B	Q9BQ04	359 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TINF2	Q9BSI4	451 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CINP	Q9BW66	212 aa	Predicted RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	RBM4	Q9BWF3	364 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PRDM8	Q9NQV8	689 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	CHST12	Q9NRB3	414 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	MPP6	Q9NZW5	540 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TMEM216	Q9P0N5	145 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	KAT6A	Q92794	2004 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	TRAV20	A0A0B4J274	112 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	WRB	O00258	174 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	E2F3	O00716	465 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FAM86B2	P0C5J1	330 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	GRIA4	P48058	902 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	POLD2	P49005	469 aa		8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	YWHAE	P62258	255 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	PURA	Q00577	322 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ALDH6A1	Q02252	535 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	IFRD2	Q12894	506 aa	Predicted RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	FAM98C	Q17RN3	349 aa	Known RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ZNF772	Q68DY9	489 aa	Predicted RBP	8.17	□□□□□ -1.1
CRNKL1-205	ENST00000496549	ZNF425	Q6IV72	752 aa		8.17	□□□□□ -1.1

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms