RNA–Protein interactions for RNA: ENST00000495357.1

CCDC39-AS1-201, CCDC39 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene CCDC39-AS1, Length 283 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-AS1-201ENST00000495357 R3HCC1LQ7Z5L2 792 aaKnown RBP4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 TMPRSS12Q86WS5 348 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 SFR1Q86XK3 245 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 TMEM219Q86XT9 240 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 C1orf87Q8N0U7 546 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 CNTROBQ8N137 903 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 METTL6Q8TCB7 284 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 CD101Q93033 1021 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 PPM1MQ96MI6 270 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 INPP4AQ96PE3 977 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 SEC62Q99442 399 aaKnown RBP4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 PCYT2Q99447 389 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 STRA6Q9BX79 667 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 SCPEP1Q9HB40 452 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 ZNF711Q9Y462 761 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 PCDHAC2Q9Y5I4 1007 aa4.47□□□□□ -1.69
CCDC39-AS1-201ENST00000495357 A0A1W2PPH5 198 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 VCYO14598 125 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 NPHP1O15259 732 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 IGKV3-20P01619 116 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 UMODP07911 640 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TROAPQ12815 778 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TMEM115Q12893 351 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ALFQ53S48 1182 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ZNF280DQ6N043 979 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 DUS1LQ6P1R4 473 aaKnown RBP4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 BEST3Q8N1M1 668 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PCDH20Q8N6Y1 951 aaKnown RBP4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 RFFLQ8WZ73 363 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 IGSF8Q969P0 613 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 GRAMD2BQ96HH9 432 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 NODALQ96S42 347 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CMKLR1Q99788 373 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TMEM47Q9BQJ4 181 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 SDF2L1Q9HCN8 221 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 LTB4R2Q9NPC1 389 aa4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ARID4BQ4LE39 1312 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 A0A1W2PRG0 241 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 LILRA5A6NI73 299 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 NTN3O00634 580 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 XPNPEP2O43895 674 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PAGE4O60829 102 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 SEC14L2O76054 403 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ITGA2P17301 1181 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 AMD1P17707 334 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CORO1AP31146 461 aaKnown RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TMPOP42166 694 aaKnown RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 RPL7AP62424 266 aaKnown RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 OLR1P78380 273 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 G3BP1Q13283 466 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 SIGIRRQ6IA17 410 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ATF7IPQ6VMQ6 1270 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ZNF329Q86UD4 541 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CCDC13Q8IYE1 715 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 KBTBD3Q8NAB2 608 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PCYOX1LQ8NBM8 494 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 NAXEQ8NCW5 288 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PERPQ96FX8 193 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ACOX2Q99424 681 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PLEKHA5Q9HAU0 1116 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 SEBOXQ9HB31 216 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 PADI1Q9ULC6 663 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ADAM18Q9Y3Q7 739 aa4.45□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 A0A1W2PQF6 199 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CCDC189A1A4V9 331 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CREB3O43889 395 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CDH1P12830 882 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 MYOD1P15172 320 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 IL7RP16871 459 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ZNF182P17025 639 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 FASLGP48023 281 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TBX2Q13207 712 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CCNG2Q16589 344 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 SYT16Q17RD7 645 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 FRG2Q64ET8 278 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TRNP1Q6NT89 227 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 BRAT1Q6PJG6 821 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TSSK4Q6SA08 328 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 DPPA4Q7L190 304 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 DSG4Q86SJ6 1040 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 NRROSQ86YC3 692 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 RNF113BQ8IZP6 322 aaKnown RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 MAB21L3Q8N8X9 362 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 KCNH5Q8NCM2 988 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 OR14L1PQ8NHC6 308 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 BBS10Q8TAM1 723 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 HMGCLL1Q8TB92 370 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 INTS12Q96CB8 462 aaKnown RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 MMABQ96EY8 250 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CDCA5Q96FF9 252 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 MAP7D2Q96T17 732 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 MTERF1Q99551 399 aaKnown RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 RANBP17Q9H2T7 1088 aaKnown RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 TCF7L2Q9NQB0 619 aa4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 ACSS1Q9NUB1 689 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-AS1-201ENST00000495357 CNOT8Q9UFF9 292 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms