RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 UBXN6Q9BZV1 441 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 SLC32A1Q9H598 525 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 TMEM30AQ9NV96 361 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 OGFRQ9NZT2 677 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.8□□□□□ -1.8
PHC3-213ENST00000491258 CHPF2Q9P2E5 772 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 RCOR1Q9UKL0 485 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 PRSS21Q9Y6M0 314 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 SETD1AO15047 1707 aaKnown RBP3.8□□□□□ -1.8
PHC3-213ENST00000491258 NEURL4Q96JN8 1562 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 MAST1Q9Y2H9 1570 aa3.8□□□□□ -1.8
PHC3-213ENST00000491258 ADAMTS13Q76LX8 1427 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 NCOA3Q9Y6Q9 1424 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 STRCQ7RTU9 1775 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 MSH6P52701 1360 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 PIK3R4Q99570 1358 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 PREX1Q8TCU6 1659 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 PPM1GO15355 546 aaPredicted RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 CEP104O60308 925 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SLC2A4P14672 509 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 S1PR1P21453 382 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 CHRNB4P30926 498 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 HOXA1P49639 335 aaPredicted RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 CLCNKAP51800 687 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 TERF1P54274 439 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 YWHAZP63104 245 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 ICA1Q05084 483 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 TBL3Q12788 808 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 TIGD6Q17RP2 521 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SIRPB2Q5JXA9 342 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SFMBT2Q5VUG0 894 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 TANGO2Q6ICL3 276 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 TRNP1Q6NT89 227 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SUSD1Q6UWL2 747 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SLC36A4Q6YBV0 504 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 BRINP3Q76B58 766 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 FOXRED2Q8IWF2 684 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 ZNF34Q8IZ26 560 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 RNF113BQ8IZP6 322 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 C1orf87Q8N0U7 546 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 CPXM2Q8N436 756 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 SCCPDHQ8NBX0 429 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 AGBL3Q8NEM8 1001 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 HCAR2Q8TDS4 363 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 RUBCNQ92622 972 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 WDR12Q9GZL7 423 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 FKRPQ9H9S5 495 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 UPF2Q9HAU5 1272 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 SMYD2Q9NRG4 433 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 TMEM160Q9NX00 188 aa3.79□□□□□ -1.8
PHC3-213ENST00000491258 RPRD2Q5VT52 1461 aaKnown RBP3.79□□□□□ -1.8
PHC3-213ENST00000491258 METP08581 1390 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 JCADQ9P266 1359 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 C3P01024 1663 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 RPGRIP1LQ68CZ1 1315 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 KLK8O60259 260 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 PARNO95453 639 aaKnown RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 G6PDP11413 515 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 MYOD1P15172 320 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 EIF2S3P41091 472 aaKnown RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 LUMP51884 338 aaPredicted RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 DSCR10P59022 87 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 IRX1P78414 480 aaPredicted RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 GRIK2Q13002 908 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 CCNYL2Q5T2Q4 361 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 DENND1BQ6P3S1 775 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 SLC27A1Q6PCB7 646 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 KIAA2013Q8IYS2 634 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 PPM1EQ8WY54 764 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 MXRA8Q9BRK3 442 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 POLR3CQ9BUI4 534 aaPredicted RBP3.78□□□□□ -1.8
PHC3-213ENST00000491258 NUF2Q9BZD4 464 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 CDC42BPAQ5VT25 1732 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 PTPRUQ92729 1446 aa3.78□□□□□ -1.8
PHC3-213ENST00000491258 MROH1Q8NDA8 1641 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 ALKQ9UM73 1620 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 SETBP1Q9Y6X0 1596 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 EFCAB6Q5THR3 1501 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 C17orf113A0A1B0GUU1 675 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 HHLA1C9JL84 531 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 STX16-NPEPL1H3BU86 382 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 STX16O14662 325 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 WDR1O75083 606 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 KRT18P05783 430 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 RXRAP19793 462 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 CST5P28325 142 aaPredicted RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 BLKP51451 505 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 CLDN2P57739 230 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 CUL4BQ13620 913 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 LRRC8EQ6NSJ5 796 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 C15orf39Q6ZRI6 1047 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 TAOK1Q7L7X3 1001 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 NOTCH2NLQ7Z3S9 236 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 TM9SF4Q92544 642 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 CNOT9Q92600 299 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 LRRC59Q96AG4 307 aaKnown RBP3.77□□□□□ -1.81
PHC3-213ENST00000491258 ST6GAL2Q96JF0 529 aa3.77□□□□□ -1.81
PHC3-213ENST00000491258 LRR1Q96L50 414 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms