RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SFMBT1Q9UHJ3 866 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 SDHDO14521 159 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 CHRM3P20309 590 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 YWHAQP27348 245 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 EPHX2P34913 555 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 GCNT7Q6ZNI0 430 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 SLC15A3Q8IY34 581 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 SVOPLQ8N434 492 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 STON2Q8WXE9 905 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TUT1Q9H6E5 874 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TMEM161AQ9NX61 479 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 IKZF3Q9UKT9 509 aa11.28□□□□□ -0.6
CRNKL1-204ENST00000490910 LACTBL1A8MY62 500 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 XYLBO75191 536 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 LRIG2O94898 1065 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 F9P00740 461 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 ERCC2P18074 760 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 AZGP1P25311 298 aaKnown RBP11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 POU1F1P28069 291 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 POLD2P49005 469 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 PPP5CP53041 499 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 TAS2R39P59534 338 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 OLR1P78380 273 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 MAPKAPK3Q16644 382 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 SYT16Q17RD7 645 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 FAM182BQ5T319 152 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 SDE2Q6IQ49 451 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 NAPRTQ6XQN6 538 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 PRR23CQ6ZRP0 262 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 CYS1Q717R9 158 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 C16orf62Q7Z3J2 963 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 MFSD2AQ8NA29 543 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 IDI2Q9BXS1 227 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 SEZ6LQ9BYH1 1024 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 TOR3AQ9H497 397 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 ITM2CQ9NQX7 267 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 STOML2Q9UJZ1 356 aa11.27□□□□□ -0.6
CRNKL1-204ENST00000490910 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 CYP7B1O75881 506 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PGK2P07205 417 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 IFI30P13284 250 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 SLC15A1P46059 708 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PLA2G16P53816 162 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ADIGQ0VDE8 80 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 C6orf141Q5SZD1 244 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 UBE2UQ5VVX9 321 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 CCBE1Q6UXH8 406 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 FAM35AQ86V20 835 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 C12orf29Q8N999 325 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATA33Q96N06 139 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ALPK1Q96QP1 1244 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF717Q9BY31 904 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 MROQ9BYG7 248 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ASB7Q9H672 318 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ANKHQ9HCJ1 492 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 DNAJB9Q9UBS3 223 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PCDHGB4Q9UN71 923 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 H3BMM5 538 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ACKR2O00590 384 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 CRYZL1O95825 349 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ADRA2BP18089 450 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 C4BPBP20851 252 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 GSTM2P28161 218 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 FMO3P31513 532 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 TCF7P36402 384 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 POLR2JP52435 117 aaKnown RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 SCN1BQ07699 218 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 KCTD2Q14681 263 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 VPS72Q15906 364 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF57Q68EA5 555 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ZNF517Q6ZMY9 492 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ITIH5Q86UX2 942 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 METTL23Q86XA0 190 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 GBA3Q9H227 469 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 ARMC1Q9NVT9 282 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PKP3Q9Y446 797 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PCDHGA7Q9Y5G6 932 aa11.27□□□□□ -0.61
CRNKL1-204ENST00000490910 PLOD2O00469 737 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 CPNE3O75131 537 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 NFICP08651 508 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 NMBRP28336 390 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 EEFSECP57772 596 aaKnown RBP11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 AGAP7PQ5VUJ5 663 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 TTC23LQ6PF05 361 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 USP43Q70EL4 1123 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 SPATA19Q7Z5L4 167 aa11.26□□□□□ -0.61
CRNKL1-204ENST00000490910 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms