RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 PKP1Q13835 747 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 PGM5Q15124 567 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 LEXMQ3ZCV2 418 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 DHRS7BQ6IAN0 325 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 LRIG3Q6UXM1 1119 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 RHOUQ7L0Q8 258 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 CATSPER4Q7RTX7 472 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 NUP54Q7Z3B4 507 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 UBE2Q1Q7Z7E8 422 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 ADIPOR2Q86V24 386 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 IGFN1Q86VF2 1251 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 TMC8Q8IU68 726 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 LCORLQ8N3X6 602 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 OR10S1Q8NGN2 331 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 WIPF2Q8TF74 440 aaPredicted RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 HAS1Q92839 578 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 LENG9Q96B70 501 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 AK8Q96MA6 479 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 NUDCD1Q96RS6 583 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 INTS14Q96SY0 518 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 DNAJC18Q9H819 358 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 CNOT10Q9H9A5 744 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 DDX4Q9NQI0 724 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 PAPOLBQ9NRJ5 636 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 DNAJB4Q9UDY4 337 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 DDX25Q9UHL0 483 aaKnown RBP6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 HACL1Q9UJ83 578 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 MAFFQ9ULX9 164 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 CLIC4Q9Y696 253 aa6.54□□□□□ -1.36
TM9SF3-206ENST00000490192 TRBV5-7A0A0A0MS05 114 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 WIPF3A6NGB9 483 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 CGB1A6NKQ9 187 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 ANXA2P2A6NMY6 339 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 INO80B-WBP1J3KQ70 363 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 B3GALNT1O75752 331 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PDGFRAP16234 1089 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PRLRP16471 622 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 HSPA4P34932 840 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PTGS2P35354 604 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PRCPP42785 496 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 MTHFRP42898 656 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 GPR12P47775 334 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PMPCAQ10713 525 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PPIGQ13427 754 aaKnown RBP eCLIP6.53□□□□□ -1.361e-6■■□□□ 13.7
TM9SF3-206ENST00000490192 CAPSQ13938 189 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 RCN2Q14257 317 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 ARHGEF6Q15052 776 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PPA1Q15181 289 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 SOWAHAQ2M3V2 549 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 C2orf68Q2NKX9 166 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 FAM153CQ494X1 144 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PLEKHO1Q53GL0 409 aaPredicted RBP6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 USP39Q53GS9 565 aaKnown RBP6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 KRT39Q6A163 491 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 CEP85Q6P2H3 762 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 LINC00696Q6ZRV3 163 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 HAUS6Q7Z4H7 955 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 SERPINA11Q86U17 422 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 LDB1Q86U70 411 aaPredicted RBP6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 WDR63Q8IWG1 891 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 PARP16Q8N5Y8 322 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 TRIML1Q8N9V2 468 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 MCPH1Q8NEM0 835 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 TRPC4APQ8TEL6 797 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 SNAPC3Q92966 411 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 ARSGQ96EG1 525 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 EGLN2Q96KS0 407 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 MLPHQ9BV36 600 aaPredicted RBP6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 MLST8Q9BVC4 326 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 TRMT1Q9NXH9 659 aaKnown RBP6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 FBXW11Q9UKB1 542 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 ERVK-11Q9UQG0 969 aa6.53□□□□□ -1.36
TM9SF3-206ENST00000490192 SLC22A23A1A5C7 686 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 LRRD1A4D1F6 860 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 CCDC188H7C350 402 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 SIX3O95343 332 aaPredicted RBP6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 PLAUP00749 431 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 LCKP06239 509 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ZFYP08048 801 aaPredicted RBP6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 MMP2P08253 660 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 TFPIP10646 304 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 SRCP12931 536 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 GJA1P17302 382 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 BMP5P22003 454 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 TCEA1P23193 301 aaKnown RBP6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 LASP1Q14847 261 aaKnown RBP6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ANKRD20A4Q4UJ75 823 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ANKRD20A8PQ5CZ79 823 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ANKRD20A2Q5SQ80 823 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ANKRD20A1Q5TYW2 823 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 ANKRD20A3Q5VUR7 823 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 CRIP3Q6Q6R5 217 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 DPPA4Q7L190 304 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 DSG4Q86SJ6 1040 aa6.52□□□□□ -1.37
TM9SF3-206ENST00000490192 FAM217AQ8IXS0 508 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms