RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 CTAGE8P0CG41 777 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 FASLGP48023 281 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 ATP12AP54707 1039 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 EEF1A1P68104 462 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 SORDQ00796 357 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 FCN2Q15485 313 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 PRICKLE4Q2TBC4 344 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 SLC9B1Q4ZJI4 515 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 CCNYL2Q5T2Q4 361 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 GPATCH4Q5T3I0 446 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 STXBP5Q5T5C0 1151 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 EEF1A1P5Q5VTE0 462 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 CYP26C1Q6V0L0 522 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 ZNF852Q6ZMS4 543 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 CTAGE4Q8IX94 777 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 FAM76AQ8TAV0 307 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 GRAPLQ8TC17 118 aaPredicted RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 TAF15Q92804 592 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 PABPC5Q96DU9 382 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 MAELQ96JY0 434 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 KLHL15Q96M94 604 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 MTERF1Q99551 399 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 CMKLR1Q99788 373 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 RBM4Q9BWF3 364 aaKnown RBP3.66□□□□□ -1.82
HMGN1-218ENST00000490032 OR2W1Q9Y3N9 320 aa3.66□□□□□ -1.82
HMGN1-218ENST00000490032 LDLRP01130 860 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 PRSS1P07477 247 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 HOXA1P49639 335 aaPredicted RBP3.65□□□□□ -1.83
HMGN1-218ENST00000490032 MMP14P50281 582 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 NR0B1P51843 470 aaKnown RBP3.65□□□□□ -1.83
HMGN1-218ENST00000490032 GAGE5Q13069 117 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 GAGE6Q13070 117 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 GTF2H2Q13888 395 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF234Q14588 700 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 BAK1Q16611 211 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 TMEM30BQ3MIR4 351 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 FRG2Q64ET8 278 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 GTF2H2CQ6P1K8 395 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 BRAT1Q6PJG6 821 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 KCTD8Q6ZWB6 473 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 SLC46A3Q7Z3Q1 461 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 PCDH20Q8N6Y1 951 aaKnown RBP3.65□□□□□ -1.83
HMGN1-218ENST00000490032 KLHDC9Q8NEP7 349 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 PIGTQ969N2 578 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 UBXN10Q96LJ8 280 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF583Q96ND8 569 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 PCYT2Q99447 389 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 IFIH1Q9BYX4 1025 aaKnown RBP3.65□□□□□ -1.83
HMGN1-218ENST00000490032 BRF2Q9HAW0 419 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 TBX20Q9UMR3 447 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
HMGN1-218ENST00000490032 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 CDAP32320 146 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 GNAQP50148 359 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 ISL1P61371 349 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 CSNK2A1P68400 391 aaPredicted RBP3.64□□□□□ -1.83
HMGN1-218ENST00000490032 RPP30P78346 268 aaKnown RBP3.64□□□□□ -1.83
HMGN1-218ENST00000490032 TAF12Q16514 161 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 USP41Q3LFD5 358 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 C6orf141Q5SZD1 244 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 PDSS1Q5T2R2 415 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF280DQ6N043 979 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 DUS1LQ6P1R4 473 aaKnown RBP3.64□□□□□ -1.83
HMGN1-218ENST00000490032 PQLC2Q6ZP29 291 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 ANKRD42Q8N9B4 389 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 CSNK2A3Q8NEV1 391 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 RHBDF1Q96CC6 855 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 KLHL29Q96CT2 875 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 APOPT1Q96IL0 206 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 F2RL3Q96RI0 385 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 MPHOSPH8Q99549 860 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 GFRA4Q9GZZ7 299 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 PPCSQ9HAB8 311 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 KCND2Q9NZV8 630 aa3.64□□□□□ -1.83
HMGN1-218ENST00000490032 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 TSPAN4O14817 238 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 PEX14O75381 377 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 HNRNPA1P09651 372 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGN1-218ENST00000490032 GGT5P36269 586 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 ARL1P40616 181 aaPredicted RBP3.63□□□□□ -1.83
HMGN1-218ENST00000490032 TERF1P54274 439 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 ERVK11-1P61568 191 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 FOXM1Q08050 763 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 GALNT2Q10471 571 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 SREBF2Q12772 1141 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 GPR68Q15743 365 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 ARHGAP17Q68EM7 881 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 HAPLN4Q86UW8 402 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 NRROSQ86YC3 692 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 BEST3Q8N1M1 668 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 OR5R1Q8NH85 324 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 THAP6Q8TBB0 222 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF524Q96C55 264 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 GRAMD2BQ96HH9 432 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 C17orf77Q96MU5 243 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 QRFPRQ96P65 431 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 NEURL2Q9BR09 285 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 LTB4R2Q9NPC1 389 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 FAM118AQ9NWS6 357 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 DDX43Q9NXZ2 648 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms