RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 GABARAPO95166 117 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 MYL3P08590 195 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SPNP16150 400 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ITIH1P19827 911 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 FSHRP23945 695 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ALDH7A1P49419 539 aaKnown RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PPP5CP53041 499 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LIPEQ05469 1076 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 UBE2UQ5VVX9 321 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LAIR2Q6ISS4 152 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ACOT1Q86TX2 421 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 STK32CQ86UX6 486 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 HEATR4Q86WZ0 1026 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PTRH1Q86Y79 214 aaKnown RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LYSMD2Q8IV50 215 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF280CQ8ND82 737 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 RHOXF1Q8NHV9 184 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 OSCP1Q8WVF1 389 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 TMBIM1Q969X1 311 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 C19orf60Q96EN9 201 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PCYT2Q99447 389 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 BTBD2Q9BX70 525 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 EMILIN2Q9BXX0 1053 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PIF1Q9H611 641 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 MARCH7Q9H992 704 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ABCB10Q9NRK6 738 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SETD4Q9NVD3 440 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 FAM118AQ9NWS6 357 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PAK1IP1Q9NWT1 392 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 TESMINQ9Y4I5 508 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SNX5Q9Y5X3 404 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PTGDR2Q9Y5Y4 395 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 CNTNAP1P78357 1384 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 M0QX08 132 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SLC22A1O15245 554 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 KPNA6O60684 536 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 NTRK1P04629 796 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 CDH1P12830 882 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LCP1P13796 627 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ATICP31939 592 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PHC1P78364 1004 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 GRB7Q14451 532 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 TECRLQ5HYJ1 363 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 IL31Q6EBC2 164 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 PAGE2Q7Z2X7 111 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 DCP2Q8IU60 420 aaKnown RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LACC1Q8IV20 430 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 RIMKLAQ8IXN7 391 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 OR13J1Q8NGT2 312 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SDCCAG3Q96C92 435 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 CDHR1Q96JP9 859 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 NODALQ96S42 347 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 YME1L1Q96TA2 773 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 CCDC90BQ9GZT6 254 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 CDT1Q9H211 546 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 GSTO2Q9H4Y5 243 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 SPC25Q9HBM1 224 aa10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF70Q9UC06 446 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-208ENST00000486641 ZNF646O15015 1829 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 A0A087X1B8 175 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 ZBBXA8MT70 800 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CENPBD1B2RD01 187 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 MGEA5O60502 916 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 GSNP06396 782 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 ASNSP08243 561 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 NPR1P16066 1061 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CES1P23141 567 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 HRH2P25021 359 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CASP3P42574 277 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SERPINB10P48595 397 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SEPHS1P49903 392 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 TPD52P55327 224 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 GABARAPL2P60520 117 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 EMX1Q04741 257 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CD47Q08722 323 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 PAFAH1B3Q15102 231 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 BTBD8Q5XKL5 378 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 TTC23LQ6PF05 361 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 ZBTB8OSQ8IWT0 167 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 MIER2Q8N344 545 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 DYNC2LI1Q8TCX1 351 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 PHF10Q8WUB8 498 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 FAR1Q8WVX9 515 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 AURKBQ96GD4 344 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 DACH2Q96NX9 599 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 C17orf80Q9BSJ5 609 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 KIFC1Q9BW19 673 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SLC52A3Q9NQ40 469 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 NRBP2Q9NSY0 501 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms