RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ANKRD34BA5PLL1 514 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 M0QYT0 321 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CLIC2O15247 247 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 ALOX15BO15296 676 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 EPB41L2O43491 1005 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 BUB1BO60566 1050 aaPredicted RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 RFPL1O75677 317 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 DNAJB5O75953 348 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SORBS2O94875 1100 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 VNN1O95497 513 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 C4BPAP04003 597 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 GLI4P10075 376 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CTSEP14091 401 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 BMP7P18075 431 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CD58P19256 250 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 HOXA5P20719 270 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 GJB2P29033 226 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 LEPRP48357 1165 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 RPS21P63220 83 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 MC1RQ01726 317 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 PPARDQ03181 441 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SULT2A1Q06520 285 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SGCGQ13326 291 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 ARHGEF7Q14155 803 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 AMZ1Q400G9 498 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 DCAF6Q58WW2 860 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 RILPL1Q5EBL4 403 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 MS4A13Q5J8X5 152 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 RAB41Q5JT25 222 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CERCAMQ5T4B2 595 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 ARL6IP4Q66PJ3 421 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SPOPLQ6IQ16 392 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 KIAA1161Q6NSJ0 714 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 LVRNQ6Q4G3 990 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 ERN2Q76MJ5 926 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 RD3Q7Z3Z2 195 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 KDELC2Q7Z4H8 507 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SPRED1Q7Z699 444 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 PIM3Q86V86 326 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 XYLT1Q86Y38 959 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SFTPA2Q8IWL1 248 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 NRSN1Q8IZ57 195 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 FAM184AQ8NB25 1140 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 NLGN4YQ8NFZ3 816 aaPredicted RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 ERCC4Q92889 916 aaPredicted RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 DNAJC19Q96DA6 116 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 FEM1CQ96JP0 617 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 LURAP1Q96LR2 239 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 TBATAQ96M53 351 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 KLF6Q99612 283 aaPredicted RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 EFHD1Q9BUP0 239 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SLC29A3Q9BZD2 475 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 SLC39A1Q9NY26 324 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 LRIT1Q9P2V4 623 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 APPL1Q9UKG1 709 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 PILRAQ9UKJ1 303 aa5.4□□□□□ -1.54
PTPN4-210ENST00000485247 MRPS18BQ9Y676 258 aaKnown RBP5.4□□□□□ -1.54
PTPN4-210ENST00000485247 CSMD2Q7Z408 3487 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ZC3H12DA2A288 527 aaKnown RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 IGLON5A6NGN9 336 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 YJEFN3A6XGL0 299 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 E7ENQ6 273 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TULP2O00295 520 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 HGSO14964 777 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 SPTLC2O15270 562 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TGFB1I1O43294 461 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 NADKO95544 446 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 CPNE6O95741 557 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 MOCS2O96007 188 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 IGLV3-27P01718 113 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ALPIP09923 528 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 PDCP20941 246 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 CHRNA3P32297 505 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 HOXD13P35453 343 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TBX4P57082 545 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 INCA1Q0VD86 236 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ERV3-1Q14264 604 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ELOCQ15369 112 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 VMACQ2NL98 169 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 DCAF12Q5T6F0 453 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 ANKS6Q68DC2 871 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 PM20D1Q6GTS8 502 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TMEM135Q86UB9 458 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 CIR1Q86X95 450 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 GKN2Q86XP6 184 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 LGI2Q8N0V4 545 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 XXYLT1Q8NBI6 393 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 CHST14Q8NCH0 376 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 CCDC112Q8NEF3 446 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 GPR156Q8NFN8 814 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 PLEKHO2Q8TD55 490 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 TSACCQ96A04 125 aaPredicted RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 C19orf60Q96EN9 201 aa5.39□□□□□ -1.55
PTPN4-210ENST00000485247 IPO9Q96P70 1041 aaKnown RBP5.39□□□□□ -1.55
PTPN4-210ENST00000485247 LENG8Q96PV6 779 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms