RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PSAPL1Q6NUJ1 521 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 GATAD2AQ86YP4 633 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 SDR16C5Q8N3Y7 309 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 SCAMP4Q969E2 229 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 LRRC45Q96CN5 670 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 CAMK1GQ96NX5 476 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 WDR24Q96S15 920 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 NAP1L3Q99457 506 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-213ENST00000485080 GPR63Q9BZJ6 419 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 FAM83DQ9H4H8 585 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 PNMA8BQ9ULN7 279 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-213ENST00000485080 SNX12Q9UMY4 172 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 SPO11Q9Y5K1 396 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 KNTC1P50748 2209 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 NEMP2A6NFY4 417 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 SCAMP1O15126 338 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 PPFIA2O75334 1257 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 AGTP01019 485 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 GIMD1P0DJR0 217 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 CHRNA4P43681 627 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 GPR1P46091 355 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 HK3P52790 923 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 CDK3Q00526 305 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 MSLNQ13421 630 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 TRIP6Q15654 476 aaKnown RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 ALG11Q2TAA5 492 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 ZDHHC20Q5W0Z9 365 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 PDPK2PQ6A1A2 396 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 RAET1GQ6H3X3 334 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 DENND5AQ6IQ26 1287 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 C4orf22Q6V702 233 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 HEATR4Q86WZ0 1026 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 PHACTR4Q8IZ21 702 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 TTC30BQ8N4P2 665 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 PRELID2Q8N945 189 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 ACTRT1Q8TDG2 376 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 SCARF2Q96GP6 870 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 COX14Q96I36 57 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 OSBPL9Q96SU4 736 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 RIOK2Q9BVS4 552 aaKnown RBP17.71■□□□□ 0.43
SREBF1-213ENST00000485080 LGR4Q9BXB1 951 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 SPASTQ9UBP0 616 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 SHOC2Q9UQ13 582 aa17.71■□□□□ 0.43
SREBF1-213ENST00000485080 TMEM202A6NGA9 273 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 GOLGA8CPA6NN73 597 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 F5H423 210 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 TPP1O14773 563 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 GIPC1O14908 333 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 RASGRP1O95267 797 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 AP2A1O95782 977 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 PIRTP0C851 137 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FDFT1P37268 417 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 SRP54P61011 504 aaKnown RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FOXK2Q01167 660 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 ZNF542PQ5EBM4 170 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 ENPP7Q6UWV6 458 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FSTL5Q8N475 847 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 SLC25A41Q8N5S1 370 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FAM181AQ8N9Y4 354 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 OR4C6Q8NH72 309 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 PLEKHG4BQ96PX9 1271 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 ZSCAN5AQ9BUG6 496 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FICDQ9BVA6 458 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 DUSP23Q9BVJ7 150 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FRMD8Q9BZ67 464 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 SLC13A1Q9BZW2 595 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 LRRC40Q9H9A6 602 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 FGF22Q9HCT0 170 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 UCKL1Q9NWZ5 548 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 NLGN3Q9NZ94 848 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 IL17CQ9P0M4 197 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 KLQ9UEF7 1012 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 APOBEC3BQ9UH17 382 aaKnown RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 CD84Q9UIB8 345 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 CNOT6Q9ULM6 557 aaKnown RBP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 SLC17A4Q9Y2C5 497 aa17.7■□□□□ 0.42
SREBF1-213ENST00000485080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
SREBF1-213ENST00000485080 LRP4O75096 1905 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 LMO7DNF2Z398 122 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 AURKAO14965 403 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 AQP9O43315 295 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 TNFSF14O43557 240 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 SDC3O75056 442 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 DKK1O94907 266 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 TCP1P17987 556 aaKnown RBP17.69■□□□□ 0.42
SREBF1-213ENST00000485080 ACTN2P35609 894 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 SNX1Q13596 522 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 CYP1B1Q16678 543 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 FAXCQ5TGI0 409 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 PAPD7Q5XG87 772 aaKnown RBP17.69■□□□□ 0.42
SREBF1-213ENST00000485080 LVRNQ6Q4G3 990 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 TRAM1L1Q8N609 369 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 BRSK1Q8TDC3 778 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 OR1E3Q8WZA6 343 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 HIC2Q96JB3 615 aa17.69■□□□□ 0.42
SREBF1-213ENST00000485080 AGAP2Q99490 1192 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms