RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 OR56A4Q8NGH8 313 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 CCDC110Q8TBZ0 833 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 EID2BQ96D98 161 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 COX14Q96I36 57 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 PLEKHG4BQ96PX9 1271 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 WDR24Q96S15 920 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 TMEM121Q9BTD3 319 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 SLC13A1Q9BZW2 595 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 FAM83DQ9H4H8 585 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 C10orf88Q9H8K7 445 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 UBP1Q9NZI7 540 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 BTBD3Q9Y2F9 522 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 ZNF711Q9Y462 761 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 OR1A2Q9Y585 309 aa15.42■□□□□ 0.06
C9orf3-217ENST00000479161 ARHGEF17Q96PE2 2063 aaPredicted RBP15.42■□□□□ 0.06
C9orf3-217ENST00000479161 K7ESM1 405 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 AQP9O43315 295 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 PSMB4P28070 264 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 GPR1P46091 355 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 SRP54P61011 504 aaKnown RBP15.41■□□□□ 0.06
C9orf3-217ENST00000479161 PDE1BQ01064 536 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ILKQ13418 452 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ELOCQ15369 112 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ALG11Q2TAA5 492 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ZNF569Q5MCW4 686 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 LYSMD3Q7Z3D4 306 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 HEATR4Q86WZ0 1026 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 GATAD2AQ86YP4 633 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ZNF548Q8NEK5 533 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-217ENST00000479161 IPMKQ8NFU5 416 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 CAMK1GQ96NX5 476 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 SMIM14Q96QK8 99 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 FAM118BQ9BPY3 351 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ZSCAN5AQ9BUG6 496 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 FRMD8Q9BZ67 464 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-217ENST00000479161 GPR63Q9BZJ6 419 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 KLQ9UEF7 1012 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 APOBEC3BQ9UH17 382 aaKnown RBP15.41■□□□□ 0.06
C9orf3-217ENST00000479161 ZNF148Q9UQR1 794 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 APOBEC2Q9Y235 224 aaKnown RBP15.41■□□□□ 0.06
C9orf3-217ENST00000479161 SLC17A4Q9Y2C5 497 aa15.41■□□□□ 0.06
C9orf3-217ENST00000479161 TMEM202A6NGA9 273 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 GPR89AB7ZAQ6 455 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 GIPC1O14908 333 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 CEP104O60308 925 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 LDOC1O95751 146 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 TNFP01375 233 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 IVLP07476 585 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 GPR89BP0CG08 455 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 ACTN2P35609 894 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 FDFT1P37268 417 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 GDF10P55107 478 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 SHC2P98077 582 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 IL9RQ01113 521 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 MSLNQ13421 630 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 PROX2Q3B8N5 592 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 HS1BP3Q53T59 392 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 N4BP2L1Q5TBK1 243 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 FAXCQ5TGI0 409 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 DENND2CQ68D51 928 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 RAET1GQ6H3X3 334 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 ENPP7Q6UWV6 458 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 KDELC2Q7Z4H8 507 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 LINC00523Q86TU6 105 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 PELI3Q8N2H9 469 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 TTC30BQ8N4P2 665 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 BRSK1Q8TDC3 778 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 ACTRT1Q8TDG2 376 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 ATG4AQ8WYN0 398 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 SCAMP4Q969E2 229 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 HIC2Q96JB3 615 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 LGR4Q9BXB1 951 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 LRRC40Q9H9A6 602 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 RMI1Q9H9A7 625 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 EVA1BQ9NVM1 165 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 TRNAU1APQ9NX07 287 aaKnown RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 IL17CQ9P0M4 197 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 VPS18Q9P253 973 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 FTSJ1Q9UET6 329 aa15.4■□□□□ 0.06
C9orf3-217ENST00000479161 PNMA8BQ9ULN7 279 aaPredicted RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 ZFC3H1O60293 1989 aaKnown RBP15.4■□□□□ 0.06
C9orf3-217ENST00000479161 METTL18O95568 372 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 AP2A1O95782 977 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 CEACAM5P06731 702 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 CKMT2P17540 419 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 ACP1P24666 158 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 SIM1P81133 766 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 PEX6Q13608 980 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 TAF1AQ15573 450 aaPredicted RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 CYP1B1Q16678 543 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 LONRF2Q1L5Z9 754 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 DENND5AQ6IQ26 1287 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 ZCCHC8Q6NZY4 707 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 RFLNAQ6ZTI6 216 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 SLC35F6Q8N357 371 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 TRAM1L1Q8N609 369 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 EID2Q8N6I1 236 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 C1orf54Q8WWF1 131 aa15.39■□□□□ 0.05
C9orf3-217ENST00000479161 SCG3Q8WXD2 468 aaKnown RBP15.39■□□□□ 0.05
C9orf3-217ENST00000479161 ADAMTS14Q8WXS8 1223 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms