RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SHISA8B8ZZ34 492 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 FANCGO15287 622 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 KCNN4O15554 427 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 MTSS1O43312 755 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 SIGLEC6O43699 453 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 RFPL3O75679 317 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 PAK4O96013 591 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 THBS1P07996 1170 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 MYF5P13349 255 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 HNRNPA2B1P22626 353 aaKnown RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 SERPINA4P29622 427 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 NUDT1P36639 197 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 ARRB1P49407 418 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 BCL2L1Q07817 233 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 CYP4F3Q08477 520 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 NIPAL4Q0D2K0 466 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 WASHC5Q12768 1159 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 TRAF2Q12933 501 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 TLR1Q15399 786 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 SIX1Q15475 284 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 LONRF2Q1L5Z9 754 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 INAVAQ3KP66 663 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 TEX44Q53QW1 395 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 HS1BP3Q53T59 392 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 RALGPS1Q5JS13 557 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 NEK5Q6P3R8 708 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 C19orf48Q6RUI8 117 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 ABI3BPQ7Z7G0 1075 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 ZSWIM9Q86XI8 627 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 CAMK1DQ8IU85 385 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 ZNF567Q8N184 647 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 RASGEF1CQ8N431 466 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 PAF1Q8N7H5 531 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 SLC35B2Q8TB61 432 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 COG1Q8WTW3 980 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 C1orf54Q8WWF1 131 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 HTR3CQ8WXA8 447 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 MS4A14Q96JA4 679 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 PBKQ96KB5 322 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 KLF6Q99612 283 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 NAPGQ99747 312 aaPredicted RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 SUV39H2Q9H5I1 410 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 CCDC86Q9H6F5 360 aaKnown RBP9.17□□□□□ -0.94
SMC4-213ENST00000472282 NOD2Q9HC29 1040 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 GPR27Q9NS67 375 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 SMARCAL1Q9NZC9 954 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 SNX12Q9UMY4 172 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 ATP8A1Q9Y2Q0 1164 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 RAXQ9Y2V3 346 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 PCDHGC4Q9Y5F7 938 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 KIF26BQ2KJY2 2108 aa9.17□□□□□ -0.94
SMC4-213ENST00000472282 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 F5H423 210 aaPredicted RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 PGRMC1O00264 195 aaKnown RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 ZNF185O15231 689 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 YKT6O15498 198 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 FFAR2O15552 330 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 LIASO43766 372 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 SOCS5O75159 536 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 PROCP04070 461 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 PRKCGP05129 697 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 MMP2P08253 660 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 NFKB1P19838 968 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 DGKAP23743 735 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 CD68P34810 354 aaPredicted RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 CD86P42081 329 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 SNRPNP63162 240 aaKnown RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 OVGP1Q12889 678 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 SNX1Q13596 522 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 IHHQ14623 411 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 CFAP58Q5T655 872 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 HES3Q5TGS1 186 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 Q6ZSR6 202 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 GALNT15Q8N3T1 639 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 OXR1Q8N573 874 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 ARRDC2Q8TBH0 407 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 PDCD6IPQ8WUM4 868 aaKnown RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 MAIP1Q8WWC4 291 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 ECHDC3Q96DC8 303 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 TEKT5Q96M29 485 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 C16orf45Q96MC5 204 aaPredicted RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 ZNF641Q96N77 438 aaPredicted RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.945e-67■■■■■ 212.6
SMC4-213ENST00000472282 VAT1Q99536 393 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 FERMT1Q9BQL6 677 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 SLC17A9Q9BYT1 436 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 SLC25A51Q9H1U9 297 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 GLOD4Q9HC38 313 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 PNMA8BQ9ULN7 279 aaPredicted RBP9.16□□□□□ -0.94
SMC4-213ENST00000472282 PCDHGA1Q9Y5H4 931 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 ASXL3Q9C0F0 2248 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 RP1P56715 2156 aa9.16□□□□□ -0.94
SMC4-213ENST00000472282 CFAP47Q6ZTR5 3102 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 LY6G6EA0A0G2JKS1 128 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 IGLON5A6NGN9 336 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms