RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TECPR2O15040 1411 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PIK3R6Q5UE93 754 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ACSS2Q9NR19 701 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GLS2Q9UI32 602 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CXCL11O14625 94 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GLI1P08151 1106 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 NR1D2Q14995 579 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SGCBQ16585 318 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GHDCQ8N2G8 530 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 WNT8BQ93098 351 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TMBIM4Q9HC24 238 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQ72 361 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HAT1O14929 419 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 S100A2P29034 98 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GRIA4P48058 902 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FAM183BPQ6ZVS7 135 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HDDC3Q8N4P3 179 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ENY2Q9NPA8 101 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GNB5O14775 395 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MAGEC1O60732 1142 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SIN3BO75182 1162 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CSH1P0DML2 217 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CSH2P0DML3 217 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ANPEPP15144 967 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 WASHC2DQ5SRD0 308 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PIH1D2Q8WWB5 315 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZNF75CPQ92670 426 aaPredicted RBP13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 C12orf4Q9NQ89 552 aa13.23□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GOT1P17174 413 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTPRAP18433 802 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MC4RP32245 332 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MAGEA2P43356 314 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HID1Q8IV36 788 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MCL1Q07820 350 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZNF155Q12901 538 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FBXO48Q5FWF7 155 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SERPINB7O75635 380 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LTA4HP09960 611 aaKnown RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CXCR3P49682 368 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IFI35P80217 286 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 KCNA10Q16322 511 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 Q4G0T1 1027 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GXYLT1Q4G148 440 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ZMIZ2Q8NF64 920 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 EFHD2Q96C19 240 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PPCDCQ96CD2 204 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LGMNQ99538 433 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ETNK2Q9NVF9 386 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MSCO60682 206 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GATBO75879 557 aaKnown RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 HGFP14210 728 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ECH1Q13011 328 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TIMM50Q3ZCQ8 353 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 POC5Q8NA72 575 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BRSK1Q8TDC3 778 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BTBD10Q9BSF8 475 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ABCB9Q9NP78 766 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SEC14L3Q9UDX4 400 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 A8MU76 341 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BANF1O75531 89 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GABBR2O75899 941 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IL12BP29460 328 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 DGKZQ13574 1117 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 RAB39AQ14964 217 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ALG10Q5BKT4 473 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LRRC73Q5JTD7 316 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 SLC34A3Q8N130 599 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TMEM86AQ8N2M4 240 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 APOPT1Q96IL0 206 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 Q96MT0 163 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 IRF6O14896 467 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 FSBPO95073 299 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ALOX5P09917 674 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 BNIP1Q12981 228 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 DPYSL3Q14195 570 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 PTGES3Q15185 160 aaKnown RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 WDR59Q6PJI9 974 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 UBE2R2Q712K3 238 aaPredicted RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ASB7Q9H672 318 aa13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MRTO4Q9UKD2 239 aaKnown RBP13.22□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 NRP2O60462 931 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 MEIOBQ8N635 442 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 CD101Q93033 1021 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 AP2M1Q96CW1 435 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 GMEB2Q9UKD1 530 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 TRIM64CA6NLI5 447 aa13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 ATF4P18848 351 aaPredicted RBP13.21□□□□□ -0.29
NPHP3-ACAD11-201ENST00000471702 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms