RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 ZNF354BQ96LW1 612 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 ZSCAN31Q96LW9 406 aaPredicted RBP3.66□□□□□ -1.82
RBM39-228ENST00000471635 KLHL15Q96M94 604 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 MPHOSPH8Q99549 860 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 SH3GL2Q99962 352 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 FKRPQ9H9S5 495 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 RIC8AQ9NPQ8 531 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 FAM118AQ9NWS6 357 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 HCFC1R1Q9NWW0 138 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 ERVK-11Q9UQG0 969 aa3.66□□□□□ -1.82
RBM39-228ENST00000471635 NOTCH2Q04721 2471 aa3.65□□□□□ -1.82
RBM39-228ENST00000471635 IGKV3D-15A0A087WSY6 115 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 IRF1P10914 325 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 PSMC2P35998 433 aaKnown RBP3.65□□□□□ -1.83
RBM39-228ENST00000471635 HSD17B4P51659 736 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 CCR5P51681 352 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 TERF1P54274 439 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 KRTAP10-3P60369 221 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 UFM1P61960 85 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 PMP22Q01453 160 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 GGNBP1Q5YKI7 109 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 CEACAM20Q6UY09 585 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 LDHAL6AQ6ZMR3 332 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 HAPLN4Q86UW8 402 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 CPOQ8IVL8 374 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 HMGCLL1Q8TB92 370 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 ZNF524Q96C55 264 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 LITAFQ99732 161 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 ARPC5LQ9BPX5 153 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 MOV10L1Q9BXT6 1211 aaKnown RBP3.65□□□□□ -1.83
RBM39-228ENST00000471635 GLIS2Q9BZE0 524 aaPredicted RBP3.65□□□□□ -1.83
RBM39-228ENST00000471635 PLEKHA4Q9H4M7 779 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 UPF2Q9HAU5 1272 aaKnown RBP3.65□□□□□ -1.83
RBM39-228ENST00000471635 DLGAP4Q9Y2H0 992 aa3.65□□□□□ -1.83
RBM39-228ENST00000471635 GAGE10A6NGK3 116 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 SEC14L5O43304 696 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 FTCDO95954 541 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 PAX1P15863 534 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 POLR2CP19387 275 aaPredicted RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 HOXA1P49639 335 aaPredicted RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 EEF1A1P68104 462 aaKnown RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.64□□□□□ -1.83
RBM39-228ENST00000471635 ZNF234Q14588 700 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 EEF1A1P5Q5VTE0 462 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 ZNF772Q68DY9 489 aaPredicted RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 ARHGAP17Q68EM7 881 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 ZNF280DQ6N043 979 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 FAM171BQ6P995 826 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 RAD9BQ6WBX8 426 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 PCDH20Q8N6Y1 951 aaKnown RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 KLHDC9Q8NEP7 349 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 HERVK_113Q902F9 699 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 PIGTQ969N2 578 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 ORAI1Q96D31 301 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 SLC41A2Q96JW4 573 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 RPS6KC1Q96S38 1066 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 FAM110AQ9BQ89 295 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 H2AFJQ9BTM1 129 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 ISCA1Q9BUE6 129 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 MAP3K20Q9NYL2 800 aaKnown RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.64□□□□□ -1.83
RBM39-228ENST00000471635 A4GNTQ9UNA3 340 aa3.64□□□□□ -1.83
RBM39-228ENST00000471635 EGFP01133 1207 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 TUBBP07437 444 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 RNF224P0DH78 156 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 COX7A2P14406 83 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 GGT5P36269 586 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 GNAQP50148 359 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 TUBB4BP68371 445 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 CSNK2A1P68400 391 aaPredicted RBP3.63□□□□□ -1.83
RBM39-228ENST00000471635 FOXM1Q08050 763 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 GRAMD1BQ3KR37 738 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 SLC35E4Q6ICL7 350 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 OR7E24Q6IFN5 339 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 TTI2Q6NXR4 508 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 ZNF248Q8NDW4 579 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 CSNK2A3Q8NEV1 391 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 DBF4BQ8NFT6 615 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 LGALS12Q96DT0 336 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 ST6GAL2Q96JF0 529 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 NEURL2Q9BR09 285 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 IFIH1Q9BYX4 1025 aaKnown RBP3.63□□□□□ -1.83
RBM39-228ENST00000471635 GPR63Q9BZJ6 419 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 SLC25A10Q9UBX3 287 aaPredicted RBP3.63□□□□□ -1.83
RBM39-228ENST00000471635 GPR52Q9Y2T5 361 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 COMMD10Q9Y6G5 202 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 SCINQ9Y6U3 715 aa3.63□□□□□ -1.83
RBM39-228ENST00000471635 SNAP23O00161 211 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 EIF3FO00303 357 aaPredicted RBP3.62□□□□□ -1.83
RBM39-228ENST00000471635 VCYO14598 125 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 TNPO2O14787 897 aaKnown RBP3.62□□□□□ -1.83
RBM39-228ENST00000471635 ZNHIT1O43257 154 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 IFIT1P09914 478 aaKnown RBP3.62□□□□□ -1.83
RBM39-228ENST00000471635 PATE4P0C8F1 98 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 NR1D1P20393 614 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 AMPHP49418 695 aa3.62□□□□□ -1.83
RBM39-228ENST00000471635 MMP14P50281 582 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms