RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GNB1P62873 340 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 GAGE5Q13069 117 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 GAGE6Q13070 117 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC12A1Q13621 1099 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC45A4Q5BKX6 768 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 FRG2Q64ET8 278 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 TDRPQ86YL5 185 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 SPEM1Q8N4L4 309 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 TRIM58Q8NG06 486 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 OR5R1Q8NH85 324 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 PPP1R13BQ96KQ4 1090 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 CMKLR1Q99788 373 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 ISCA1Q9BUE6 129 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 FKRPQ9H9S5 495 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 TMEM160Q9NX00 188 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 HCN3Q9P1Z3 774 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC25A10Q9UBX3 287 aaPredicted RBP2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 GPR52Q9Y2T5 361 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM96BQ9Y3D0 163 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 KIAA1210Q9ULL0 1709 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 PRKNO60260 465 aaPredicted RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 PRSS1P07477 247 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 RNF224P0DH78 156 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 KRT2P35908 639 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 MMP14P50281 582 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 RPL24P83731 157 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 TDGQ13569 410 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 GTF2H2Q13888 395 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 VEPH1Q14D04 833 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 LPAL2Q16609 132 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 C10orf62Q5T681 223 aaPredicted RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 ANKRD45Q5TZF3 282 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC35E4Q6ICL7 350 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 GTF2H2CQ6P1K8 395 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 METTL2BQ6P1Q9 378 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 BRAT1Q6PJG6 821 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 CNBD1Q8NA66 436 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 ADAD2Q8NCV1 583 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 ACVR1CQ8NER5 493 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 DBF4BQ8NFT6 615 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC38A5Q8WUX1 472 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 PIGTQ969N2 578 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 PABPC5Q96DU9 382 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 SCRN2Q96FV2 425 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 GRAMD2BQ96HH9 432 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 METTL2AQ96IZ6 378 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 ASCL2Q99929 193 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 INTS2Q9H0H0 1204 aaKnown RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 SEBOXQ9HB31 216 aaPredicted RBP2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 BPIFA1Q9NP55 256 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 SCINQ9Y6U3 715 aa2.81□□□□□ -1.96
GTF3C3-209ENST00000466862 PTPRCP08575 1304 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 A0A1W2PQM1 296 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 BLOC1S5-TXNDC5H3BN57 136 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 EXTL3O43909 919 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 NBNO60934 754 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 HOXC13P31276 330 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 PSMC2P35998 433 aaKnown RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 GNL1P36915 607 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 RHBDL3P58872 404 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 HIST2H2ACQ16777 129 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 CCDC96Q2M329 555 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 ALG11Q2TAA5 492 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 WDR38Q5JTN6 314 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 PDSS1Q5T2R2 415 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 GGNBP1Q5YKI7 109 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 CEACAM20Q6UY09 585 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 RAD9BQ6WBX8 426 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 PQLC2Q6ZP29 291 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 BEST3Q8N1M1 668 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 ZCCHC9Q8N567 271 aaKnown RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 TMEM190Q8WZ59 177 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 ST6GAL2Q96JF0 529 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 MTERF1Q99551 399 aaKnown RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 POLR3CQ9BUI4 534 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 TFB2MQ9H5Q4 396 aaKnown RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 GPR108Q9NPR9 543 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 FAF1Q9UNN5 650 aaPredicted RBP2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 LOXL2Q9Y4K0 774 aa2.8□□□□□ -1.96
GTF3C3-209ENST00000466862 ZCWPW2A0A1B0GU75 182 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 DVL1O14640 695 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 HOXB5P09067 269 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM106CPP0CH98 169 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 ERVK-10P10266 1014 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 HSD17B4P51659 736 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 DVL1P1P54792 670 aaPredicted RBP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 TAS2R38P59533 333 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 UBE3AQ05086 875 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 NAE1Q13564 534 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 PRICKLE4Q2TBC4 344 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 GPATCH4Q5T3I0 446 aaKnown RBP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM53AQ6NSI3 398 aaPredicted RBP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 LDHAL6AQ6ZMR3 332 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 ATG9AQ7Z3C6 839 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC46A3Q7Z3Q1 461 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 LRRTM4Q86VH4 590 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 CADM4Q8NFZ8 388 aa2.79□□□□□ -1.96
GTF3C3-209ENST00000466862 OR52I2Q8NH67 350 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms