RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CLASP2O75122 1294 aaKnown RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 BAIAP3O94812 1187 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 CDK14O94921 469 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 SLC11A1P49279 550 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 OXCT1P55809 520 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 MAPRE2Q15555 327 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 PARP15Q460N3 678 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 BBS5Q8N3I7 341 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 FBXO39Q8N4B4 442 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 MAELQ96JY0 434 aaKnown RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 ZBED2Q9BTP6 218 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 Q9H521 79 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 NOL11Q9H8H0 719 aaKnown RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 FAM149AA5PLN7 773 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 EOMESO95936 686 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 ZNF37AP17032 561 aaPredicted RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 SGSHP51688 502 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 GNA12Q03113 381 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 TRIM25Q14258 630 aaKnown RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 FUT10Q6P4F1 479 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 CCDC117Q8IWD4 279 aaPredicted RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 BRSK1Q8TDC3 778 aa16.32■□□□□ 0.2
SLX4-202ENST00000466154 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
SLX4-202ENST00000466154 ANGPT2O15123 496 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 PRAMEF11O60813 436 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 FGF1P05230 155 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 PRDX3P30048 256 aaKnown RBP16.31■□□□□ 0.2
SLX4-202ENST00000466154 CNPY1Q3B7I2 92 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 CLYBLQ8N0X4 340 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 MYO1HQ8N1T3 1032 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 SCUBE2Q9NQ36 999 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 RIMS3Q9UJD0 308 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 LOC285095A0A1B0GVY8 99 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 AZIN1O14977 448 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 NIPSNAP2O75323 286 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 UGT1A6P19224 532 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 HLA-DPA1P20036 260 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 CA8P35219 290 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 INHBEP58166 350 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SLX4-202ENST00000466154 ZFP1Q6P2D0 407 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 SIDT2Q8NBJ9 832 aaKnown RBP16.31■□□□□ 0.2
SLX4-202ENST00000466154 VPS33AQ96AX1 596 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 CDK15Q96Q40 435 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 ACOX2Q99424 681 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 SLC25A23Q9BV35 468 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 IKZF3Q9UKT9 509 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 LZTS1Q9Y250 596 aa16.31■□□□□ 0.2
SLX4-202ENST00000466154 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 ACOT8O14734 319 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 CKMT2P17540 419 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 DIO3P55073 304 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 HERC3Q15034 1050 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 DNAJB14Q8TBM8 379 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 COQ10BQ9H8M1 238 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 FKBPLQ9UIM3 349 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 E5RI56 91 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 BNIP3LO60238 219 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 PAPSS2O95340 614 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 RHOCP08134 193 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 OR1D2P34982 312 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 ATP5C1P36542 298 aaKnown RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 KIAA1841Q6NSI8 718 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 CYHR1Q6ZMK1 362 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 NSMCE3Q96MG7 304 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 RANBP9Q96S59 729 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 SLC30A3Q99726 388 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 ZDHHC7Q9NXF8 308 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 TAS2R13Q9NYV9 303 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 GIPC1O14908 333 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 CASQ2O14958 399 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 SNAP91O60641 907 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 IGHA2P01877 340 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 MT-ND1P03886 318 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 CTPS1P17812 591 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 FDXRP22570 491 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 ADSLP30566 484 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 STC1P52823 247 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 YBX1P67809 324 aaKnown RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 LRP8Q14114 963 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 CCSAPQ6IQ19 270 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 FAM117BQ6P1L5 589 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 SPPL2CQ8IUH8 684 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 TRAPPC9Q96Q05 1148 aa16.3■□□□□ 0.2
SLX4-202ENST00000466154 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
SLX4-202ENST00000466154 NDST3O95803 873 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 CLPTM1O96005 669 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 APLP1P51693 650 aa16.29■□□□□ 0.2
SLX4-202ENST00000466154 IRX1P78414 480 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms