RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 APMAPQ9HDC9 416 aa16.46■□□□□ 0.23
COPS6-205ENST00000465027 NENFQ9UMX5 172 aa16.46■□□□□ 0.23
COPS6-205ENST00000465027 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
COPS6-205ENST00000465027 CACNA1DQ01668 2161 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 A1L4Q6 167 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 AKR1B10O60218 316 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 CEACAM5P06731 702 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 CHRNB2P17787 502 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 KELP23276 732 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 TRIM23P36406 574 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 POLD2P49005 469 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 FMO1Q01740 532 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 BIRC2Q13490 618 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 TRA2AQ13595 282 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPS6-205ENST00000465027 INO80DQ53TQ3 878 aaPredicted RBP16.45■□□□□ 0.22
COPS6-205ENST00000465027 CFAP58Q5T655 872 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 DCAF12Q5T6F0 453 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 NAA35Q5VZE5 725 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 PNCKQ6P2M8 343 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 DNAAF5Q86Y56 855 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 NLGN4XQ8N0W4 816 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 NLGN4YQ8NFZ3 816 aaPredicted RBP16.45■□□□□ 0.22
COPS6-205ENST00000465027 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 CASKIN2Q8WXE0 1202 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 STARD8Q92502 1023 aa16.45■□□□□ 0.22
COPS6-205ENST00000465027 KIAA1143Q96AT1 154 aaPredicted RBP16.45■□□□□ 0.22
COPS6-205ENST00000465027 TRBV23OR9-2A0A075B6M9 112 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 B4E171 279 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 J3KR12 359 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.223e-21■■□□□ 12.5
COPS6-205ENST00000465027 IPO7O95373 1038 aaKnown RBP16.44■□□□□ 0.22
COPS6-205ENST00000465027 ELFN1P0C7U0 828 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 GZMAP12544 262 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 F8A1P23610 371 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 TSPAN7P41732 249 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 HDAC4P56524 1084 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 PPP1R2P3Q6NXS1 205 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 RTL3Q8N8U3 475 aaKnown RBP16.44■□□□□ 0.22
COPS6-205ENST00000465027 HCAR2Q8TDS4 363 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 NSMCE3Q96MG7 304 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 GSDMCQ9BYG8 508 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 ASPSCR1Q9BZE9 553 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 UBA2Q9UBT2 640 aaPredicted RBP16.44■□□□□ 0.22
COPS6-205ENST00000465027 PYCARDQ9ULZ3 195 aa16.44■□□□□ 0.22
COPS6-205ENST00000465027 A0A087X0T9 212 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 CAPN5O15484 640 aaPredicted RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 SEMA7AO75326 666 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 LSM8O95777 96 aaKnown RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 MMEP08473 750 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 HOXC4P09017 264 aaPredicted RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 FAM228BP0C875 321 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 COL8A1P27658 744 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 EPHB2P29323 1055 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 GPR3P46089 330 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 PPM1FP49593 454 aaPredicted RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 NOMO3P69849 1222 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 CTBSQ01459 385 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 ILF3Q12906 894 aaKnown RBP eCLIP16.43■□□□□ 0.22
COPS6-205ENST00000465027 ACOX1Q15067 660 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 SPA17Q15506 151 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 CLPPQ16740 277 aaPredicted RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 KDELC2Q7Z4H8 507 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 HEATR4Q86WZ0 1026 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 TEX19Q8NA77 164 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 ZNF641Q96N77 438 aaPredicted RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 PDFQ9HBH1 243 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 LUC7LQ9NQ29 371 aaKnown RBP16.43■□□□□ 0.22
COPS6-205ENST00000465027 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 SUFUQ9UMX1 484 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 ADGRG1Q9Y653 693 aa16.43■□□□□ 0.22
COPS6-205ENST00000465027 C2CD4BA6NLJ0 364 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 PDGFAP04085 211 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 CYP1A1P04798 512 aaPredicted RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 FURINP09958 794 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 CCDC175P0C221 793 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 MYCLP1P12525 358 aaPredicted RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 TCN2P20062 427 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 MAP4P27816 1152 aaKnown RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 SDC4P31431 198 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 CLEC16AQ2KHT3 1053 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 AFMIDQ63HM1 303 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 DENND2CQ68D51 928 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 ZNF787Q6DD87 383 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 TMEM71Q6P5X7 295 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 DPPA4Q7L190 304 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 SRLQ86TD4 932 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 TMEM135Q86UB9 458 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 TXLNBQ8N3L3 684 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 FAM172AQ8WUF8 416 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 PCDHB18PQ96TA0 734 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 FRMD8Q9BZ67 464 aaPredicted RBP16.42■□□□□ 0.22
COPS6-205ENST00000465027 RETREG1Q9H6L5 497 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 SPTLC3Q9NUV7 552 aa16.42■□□□□ 0.22
COPS6-205ENST00000465027 KCNMB2Q9Y691 235 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms