RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 LINGO4Q6UY18 593 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 FUNDC1Q8IVP5 155 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 FAM126BQ8IXS8 530 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 SLC45A3Q96JT2 553 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 SLC39A3Q9BRY0 314 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 AKTIPQ9H8T0 292 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 COMMD8Q9NX08 183 aa18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 GMPR2Q9P2T1 348 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-210ENST00000464987 RHOBTB1O94844 696 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 SLC11A2P49281 568 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 PSAPL1Q6NUJ1 521 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 LPCAT1Q8NF37 534 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 TRPC4APQ8TEL6 797 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 LPGAT1Q92604 370 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 DCUN1D1Q96GG9 259 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 PKP2Q99959 881 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 TRMOQ9BU70 441 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 TDRD1Q9BXT4 1180 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 SLC24A3Q9HC58 644 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 BPIFA1Q9NP55 256 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 DTNAQ9Y4J8 743 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 ASB3Q9Y575 518 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 C9JVG2 144 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 TXNDC9O14530 226 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 GPR39O43194 453 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 PENKP01210 267 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 RHOCP08134 193 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 HMGA1P17096 107 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 CCNHP51946 323 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 SMARCB1Q12824 385 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 MED21Q13503 144 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 ACBD5Q5T8D3 534 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 SPATA24Q86W54 205 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 PIANPQ8IYJ0 282 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 CLYBLQ8N0X4 340 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 BBS5Q8N3I7 341 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 LRCH3Q96II8 777 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 TUBB1Q9H4B7 451 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 SCUBE2Q9NQ36 999 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 C6orf203Q9P0P8 240 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
TSPAN4-210ENST00000464987 C2orf78A6NCI8 922 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 PRORSD1PA6NEY8 169 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 TRIM38O00635 465 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 PIP5K1BO14986 540 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 OR1I1O60431 355 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 DNAJA2O60884 412 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 CRTAMO95727 393 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 CD160O95971 181 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 F11P03951 625 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 SNRPB2P08579 225 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 GFAPP14136 432 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 CALRP27797 417 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 ECT2LQ008S8 904 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 ELAVL2Q12926 359 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 ADGRE1Q14246 886 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 GEN1Q17RS7 908 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 HECTD3Q5T447 861 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 ISLR2Q6UXK2 745 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 GPR21Q99679 349 aa18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 HMX1Q9NP08 348 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 UTP6Q9NYH9 597 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-210ENST00000464987 NCF1BA6NI72 391 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 NCF1CA8MVU1 366 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 CDC7O00311 574 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 SNAP91O60641 907 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 CLASP2O75122 1294 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 SRP72O76094 671 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 MYCP01106 439 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 BMP1P13497 986 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 NCF1P14598 390 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 ARF5P84085 180 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 FOLH1Q04609 750 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 STX5Q13190 355 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 GRB7Q14451 532 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 TSNQ15631 228 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PITRM1Q5JRX3 1037 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 SLC8B1Q6J4K2 584 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 ICA1LQ8NDH6 482 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 TWIST2Q8WVJ9 160 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 ATP6V1E2Q96A05 226 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 FKBPLQ9UIM3 349 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 AGO1Q9UL18 857 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PCDHGB4Q9UN71 923 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 BTRCQ9Y297 605 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PCDHGB5Q9Y5G0 923 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 AK5Q9Y6K8 562 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PLXNA4Q9HCM2 1894 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PRSS51A0A1B0GVH4 220 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 SUPT3HB4E1H0 165 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 TRIM24O15164 1050 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 PEX1O43933 1283 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 SUPT3HO75486 399 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 EEF1DP29692 281 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 LAMB3Q13751 1172 aa18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 TAF1AQ15573 450 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 RNF219Q5W0B1 726 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-210ENST00000464987 EFHBQ8N7U6 833 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms