RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 AP1S1P61966 158 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 XIAPP98170 497 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 OR4D1Q15615 310 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 PITRM1Q5JRX3 1037 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 CFAP157Q5JU67 520 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 ARMC12Q5T9G4 340 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 PAQR3Q6TCH7 311 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 POU5F2Q8N7G0 328 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 RBM15BQ8NDT2 890 aaKnown RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 SCG3Q8WXD2 468 aaKnown RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 HERVK_113Q902F9 699 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 EXT2Q93063 718 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 RAB3IPQ96QF0 476 aaPredicted RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 INTS10Q9NVR2 710 aaKnown RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 IL17CQ9P0M4 197 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 B2RBV5 119 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 NEDD8-MDP1E9PL57 170 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 TRANK1O15050 2925 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 GYG2O15488 501 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 BNIP3LO60238 219 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 NDUFS3O75489 264 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 SRP72O76094 671 aaKnown RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 SRCP12931 536 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 TSPAN8P19075 237 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 NCF2P19878 526 aaPredicted RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 DNAJB13P59910 316 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 PRKAA1Q13131 559 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 CBX2Q14781 532 aaPredicted RBP12.78□□□□□ -0.36
VAPB-203ENST00000463370 PTPRNQ16849 979 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 KLC3Q6P597 504 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 TEX9Q8N6V9 391 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 KDM1BQ8NB78 822 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 ING5Q8WYH8 240 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 NCKIPSDQ9NZQ3 722 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 TAGLN3Q9UI15 199 aa12.78□□□□□ -0.36
VAPB-203ENST00000463370 HDAC3O15379 428 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 DCXO43602 365 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 NIPSNAP2O75323 286 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 RHOBTB1O94844 696 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 RBP1P09455 135 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 PTPN2P17706 415 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 AOC1P19801 751 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.36
VAPB-203ENST00000463370 BCL2L1Q07817 233 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.36
VAPB-203ENST00000463370 RIPK1Q13546 671 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 PDCD2Q16342 344 aaPredicted RBP12.77□□□□□ -0.36
VAPB-203ENST00000463370 SH2D4BQ5SQS7 431 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 GRASPQ7Z6J2 395 aaPredicted RBP12.77□□□□□ -0.36
VAPB-203ENST00000463370 RBM23Q86U06 439 aaKnown RBP12.77□□□□□ -0.36
VAPB-203ENST00000463370 AGAP11Q8TF27 550 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 GPR21Q99679 349 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 TUBB6Q9BUF5 446 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 GPR63Q9BZJ6 419 aa12.77□□□□□ -0.36
VAPB-203ENST00000463370 LRRC14BA6NHZ5 514 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 IQCF5A8MTL0 148 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 GAPDHSO14556 408 aaPredicted RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 UBFD1O14562 309 aaKnown RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 NPHS1O60500 1241 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 HNF1BP35680 557 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 HMGCLP35914 325 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 LSM12Q3MHD2 195 aaKnown RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 TMEM198Q66K66 360 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 PIWIL4Q7Z3Z4 852 aaKnown RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 DENND2DQ9H6A0 471 aaPredicted RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
VAPB-203ENST00000463370 FIS1Q9Y3D6 152 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 L3MBTL1Q9Y468 752 aa12.77□□□□□ -0.37
VAPB-203ENST00000463370 H7C0S8 307 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 UBXN8O00124 270 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 CLASP2O75122 1294 aaKnown RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 CLDN7O95471 211 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 ATP5BP06576 529 aaKnown RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 MTHFD2P13995 350 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 SLC26A3P40879 764 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 SULT2A1Q06520 285 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 CDKN3Q16667 212 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 FBXO48Q5FWF7 155 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 PRSS36Q5K4E3 855 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 FAM151BQ6UXP7 276 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 TSPAN33Q86UF1 283 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 GSTO2Q9H4Y5 243 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 GTSE1Q9NYZ3 720 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 G3BP2Q9UN86 482 aaKnown RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 WNT6Q9Y6F9 365 aa12.76□□□□□ -0.37
VAPB-203ENST00000463370 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.76□□□□□ -0.37
VAPB-203ENST00000463370 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms