RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 CTAGE9A4FU28 777 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZNHIT1O43257 154 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SYNGR3O43761 229 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 PRKNO60260 465 aaPredicted RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 GUCY1B2O75343 617 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 TFP02787 698 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 CTAGE8P0CG41 777 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 CHRNB4P30926 498 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SHMT1P34896 483 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 LUMP51884 338 aaPredicted RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 DRG2P55039 364 aaKnown RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ARL4CP56559 192 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 EFNB1P98172 346 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 UBE4AQ14139 1066 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 TUBB8Q3ZCM7 444 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SLC45A4Q5BKX6 768 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF667Q5HYK9 610 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 TTI2Q6NXR4 508 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SLC46A3Q7Z3Q1 461 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 APLFQ8IW19 511 aaPredicted RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 CTAGE4Q8IX94 777 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SLC35F3Q8IY50 421 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 SAMD3Q8N6K7 520 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 VPS37AQ8NEZ2 397 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 OR2AK2Q8NG84 335 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 RUFY2Q8WXA3 655 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 TMEM190Q8WZ59 177 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 STAMQ92783 540 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 STAMBPL1Q96FJ0 436 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF354BQ96LW1 612 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF599Q96NL3 588 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 QRFPRQ96P65 431 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 REEP2Q9BRK0 252 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 NDST4Q9H3R1 872 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 PPP1R3EQ9H7J1 279 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 UPF2Q9HAU5 1272 aaKnown RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 HINT3Q9NQE9 182 aaKnown RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF624Q9P2J8 865 aaPredicted RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 POLG2Q9UHN1 485 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 ERVK-11Q9UQG0 969 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 RIPOR2Q9Y4F9 1068 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 LSM4Q9Y4Z0 139 aaKnown RBP1.92□□□□□ -2.1
PTPN22-203ENST00000460620 RNF215Q9Y6U7 377 aa1.92□□□□□ -2.1
PTPN22-203ENST00000460620 CAVIN2O95810 425 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 IGLV1-44P01699 117 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 GALTP07902 379 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 FAM106CPP0CH98 169 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 EDN2P20800 178 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 KRT2P35908 639 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 GRK6P43250 576 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 GNB1P62873 340 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 C2orf68Q2NKX9 166 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TMEM35AQ53FP2 167 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 FBXO47Q5MNV8 452 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 MAP3K21Q5TCX8 1036 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 FRG2Q64ET8 278 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TXNDC8Q6A555 127 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TMEM81Q6P7N7 255 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 BRAT1Q6PJG6 821 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 ATF7IPQ6VMQ6 1270 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF704Q6ZNC4 412 aaPredicted RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 STXBP4Q6ZWJ1 553 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 GTSCR1Q86UQ5 136 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 SRBD1Q8N5C6 995 aaKnown RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 STPG4Q8N801 248 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 ENAHQ8N8S7 591 aaPredicted RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TRIM58Q8NG06 486 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 HUS1BQ8NHY5 278 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 THAP6Q8TBB0 222 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 LRR1Q96L50 414 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 CMKLR1Q99788 373 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 FAM110AQ9BQ89 295 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 PHF7Q9BWX1 381 aaPredicted RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TFB2MQ9H5Q4 396 aaKnown RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 GPR108Q9NPR9 543 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 MAP3K20Q9NYL2 800 aaKnown RBP1.91□□□□□ -2.1
PTPN22-203ENST00000460620 HCN3Q9P1Z3 774 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 CTNNAL1Q9UBT7 734 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 TAGLN3Q9UI15 199 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 PTPRCP08575 1304 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 CACNA1FO60840 1977 aa1.91□□□□□ -2.1
PTPN22-203ENST00000460620 A0A0G2JLW4 131 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 GAGE10A6NGK3 116 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 HHLA1C9JL84 531 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 NR5A2O00482 541 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 HOXB5P09067 269 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 POLR2CP19387 275 aaPredicted RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 NR1D1P20393 614 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 ISL1P61371 349 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 CSNK2A1P68400 391 aaPredicted RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 RPL24P83731 157 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 FOXM1Q08050 763 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 PPP2R5BQ15173 497 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 RNPS1Q15287 305 aaKnown RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 ZNF766Q5HY98 468 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 FAM171BQ6P995 826 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 FBXO46Q6PJ61 603 aaPredicted RBP1.9□□□□□ -2.1
PTPN22-203ENST00000460620 BBS12Q6ZW61 710 aa1.9□□□□□ -2.1
PTPN22-203ENST00000460620 NOTCH2NLQ7Z3S9 236 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms