RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TEDDM1Q5T9Z0 273 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 KIAA0930Q6ICG6 404 aaPredicted RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 PSAPL1Q6NUJ1 521 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 KIAA1324Q6UXG2 1013 aaKnown RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 CEP128Q6ZU80 1094 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 USP45Q70EL2 814 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 TECPR1Q7Z6L1 1165 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 KCNMB4Q86W47 210 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 CCNJLQ8IV13 435 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 PIANPQ8IYJ0 282 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SYNPOQ8N3V7 929 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 ACVR1CQ8NER5 493 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 STYXQ8WUJ0 223 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 NAT14Q8WUY8 206 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 EDAQ92838 391 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SCAMP4Q969E2 229 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SIPA1Q96FS4 1042 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 NAT9Q9BTE0 207 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 OSBPL6Q9BZF3 934 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 PRM3Q9NNZ6 103 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 IL26Q9NPH9 171 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 HACD3Q9P035 362 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 TMPRSS11EQ9UL52 423 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 ZFR2Q9UPR6 939 aaKnown RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 MRPS17Q9Y2R5 130 aaKnown RBP10.96□□□□□ -0.65
SCN9A-205ENST00000454569 SIT1Q9Y3P8 196 aa10.96□□□□□ -0.65
SCN9A-205ENST00000454569 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.66
SCN9A-205ENST00000454569 WDFY4Q6ZS81 3184 aa10.96□□□□□ -0.66
SCN9A-205ENST00000454569 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.66
SCN9A-205ENST00000454569 A0A1W2PQ67 120 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 STX7O15400 261 aaKnown RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 RPP40O75818 363 aaKnown RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 ADH1BP00325 375 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 DNTTP04053 509 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 GSTA2P09210 222 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 TSHRP16473 764 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UGT1A6P19224 532 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UGT1A1P22309 533 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UGT1A4P22310 534 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 XPAP23025 273 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 ACSL1P33121 698 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UGT1A3P35503 534 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UGT1A5P35504 534 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 PGGT1BP53609 377 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 MPP1Q00013 466 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 SIGLEC14Q08ET2 396 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 FGL2Q14314 439 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 HSF5Q4G112 596 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 FAM46CQ5VWP2 391 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 ALS2CLQ60I27 953 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 FAM151BQ6UXP7 276 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 PPM1NQ8N819 430 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 OR6P1Q8NGX9 317 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 DCAKDQ8WVC6 231 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 KLK6Q92876 244 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 PBXIP1Q96AQ6 731 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 RUFY1Q96T51 708 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 UHRF1Q96T88 793 aaPredicted RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 NELL2Q99435 816 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 CHRDQ9H2X0 955 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 TRABDQ9H4I3 376 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 PPANQ9NQ55 473 aaKnown RBP10.95□□□□□ -0.66
SCN9A-205ENST00000454569 EURLQ9NYK6 297 aa10.95□□□□□ -0.66
SCN9A-205ENST00000454569 TLDC2A0PJX2 215 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 HMX2A2RU54 273 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PRR23AA6NEV1 266 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CYP2A6P11509 494 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 MC4RP32245 332 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 FOXN2P32314 431 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SLC1A2P43004 574 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SPINT3P49223 89 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 TPMTP51580 245 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 DMWDQ09019 674 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 MGAT5Q09328 741 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 E2F5Q15329 346 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CHRNA6Q15825 494 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SKIDA1Q1XH10 827 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CEP85LQ5SZL2 805 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 SEL1L3Q68CR1 1132 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CYS1Q717R9 158 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 RASSF3Q86WH2 238 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 CTAGE3PQ8IX95 158 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 FAM160A2Q8N612 972 aaPredicted RBP10.94□□□□□ -0.66
SCN9A-205ENST00000454569 GANCQ8TET4 914 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 RLN3Q8WXF3 142 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ARL8AQ96BM9 186 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 PPP1R16AQ96I34 528 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 COQ10AQ96MF6 247 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 HS3ST6Q96QI5 342 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 OMDQ99983 421 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 MCMBPQ9BTE3 642 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 DHRS4Q9BTZ2 278 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 TPSD1Q9BZJ3 242 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 ABCG8Q9H221 673 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 DYRK4Q9NR20 520 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 VPS18Q9P253 973 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 TBK1Q9UHD2 729 aa10.94□□□□□ -0.66
SCN9A-205ENST00000454569 RIMKLBQ9ULI2 386 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms