RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NYXQ9GZU5 481 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DCSTAMPQ9H295 470 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 METTL8Q9H825 291 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 COQ10BQ9H8M1 238 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NPDC1Q9NQX5 325 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 KCNH7Q9NS40 1196 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MTMR4Q9NYA4 1195 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RCOR3Q9P2K3 495 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 NXF1Q9UBU9 619 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 SFMBT1Q9UHJ3 866 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNRF3Q9ULT6 936 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 HCN4Q9Y3Q4 1203 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NOX1Q9Y5S8 564 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DUSP10Q9Y6W6 482 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IGSF1Q8N6C5 1336 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AKAP12Q02952 1782 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ERI2A8K979 691 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 INPP4BO15327 924 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MSH4O15457 936 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MSI1O43347 362 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 HTRA2O43464 458 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 PIGRP01833 764 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PDGFAP04085 211 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CYP3A4P08684 503 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UBBP0CG47 229 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UBCP0CG48 685 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 RAP2AP10114 183 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ALAS1P13196 640 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IFI30P13284 250 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AKR1B1P15121 316 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RPS3P23396 243 aaKnown RBP eCLIP2.2□□□□□ -2.06
USP53-202ENST00000450251 PSMA1P25786 263 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 VARSP26640 1264 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ACADLP28330 430 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SDC4P31431 198 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UGT2B10P36537 528 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 EIF2S3P41091 472 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ASMTP46597 345 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NPY2RP49146 381 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KLK7P49862 253 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ARFIP1P53367 373 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 INHBCP55103 352 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NCS1P62166 190 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RPS27AP62979 156 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 UBA52P62987 128 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 NOMO3P69849 1222 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CHAF1BQ13112 559 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TFDP1Q14186 410 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UBXN2BQ14CS0 331 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OXA1LQ15070 435 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NOMO1Q15155 1222 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PON3Q15166 354 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LRRC41Q15345 812 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TEAD4Q15561 434 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCSK7Q16549 785 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KIZQ2M2Z5 673 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GPAT3Q53EU6 434 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SMUG1Q53HV7 270 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MIIPQ5JXC2 388 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AVPI1Q5T686 147 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IDNKQ5T6J7 187 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KHDRBS2Q5VWX1 349 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 MAP1SQ66K74 1059 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 REP15Q6BDI9 236 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PAMR1Q6UXH9 720 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SNX20Q7Z614 316 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SKA3Q8IX90 412 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SVBPQ8N300 66 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 METTL25Q8N6Q8 603 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC37A3Q8NCC5 494 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR4A15Q8NGL6 344 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC39A7Q92504 469 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BAP1Q92560 729 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SH3YL1Q96HL8 342 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 MED15Q96RN5 788 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UNKLQ9H9P5 680 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 SIAEQ9HAT2 523 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RGS18Q9NS28 235 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SETD4Q9NVD3 440 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PAK1IP1Q9NWT1 392 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 WWOXQ9NZC7 414 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ACTR3BQ9P1U1 418 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KLHL8Q9P2G9 620 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 PCDHA6Q9UN73 950 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 AP4E1Q9UPM8 1137 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CRYL1Q9Y2S2 319 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCDHB12Q9Y5F1 795 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCDHA8Q9Y5H6 950 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DGKBQ9Y6T7 804 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RNF215Q9Y6U7 377 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UBR1Q8IWV7 1749 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 PNMA6FA0A0J9YX94 578 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 EFCAB7A8K855 629 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 C5orf58C9J3I9 102 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 KLRF2D3W0D1 207 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 L7N2F9 121 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 WWP2O00308 870 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PPEF2O14830 753 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC30A4O14863 429 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms