RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 MARCH9Q86YJ5 346 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 RNF10Q8N5U6 811 aaKnown RBP11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 TADA1Q96BN2 335 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 TBATAQ96M53 351 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 LYSMD1Q96S90 227 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 VAT1Q99536 393 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 RIOK2Q9BVS4 552 aaKnown RBP11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 CLPBQ9H078 707 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 GRPEL1Q9HAV7 217 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 MSRB2Q9Y3D2 182 aa11.9□□□□□ -0.5
LSP1P3-201ENST00000449530 MYLKQ15746 1914 aa11.9□□□□□ -0.51
LSP1P3-201ENST00000449530 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 NBEAQ8NFP9 2946 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 LY6G6EA0A0G2JKS1 128 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 PRSS38A1L453 326 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 SRRM3A6NNA2 597 aaPredicted RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 NDST3O95803 873 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 SOD1P00441 154 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 TNFP01375 233 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 HOXC4P09017 264 aaPredicted RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 RBP3P10745 1247 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 CKMT1AP12532 417 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 WNT3AP56704 352 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 DPTQ07507 201 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 ELOCQ15369 112 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 CDKN3Q16667 212 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 C6orf132Q5T0Z8 1188 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 KDELC1Q6UW63 502 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF765Q7L2R6 523 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 TMPRSS7Q7RTY8 843 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 PID1Q7Z2X4 250 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM181AQ8N9Y4 354 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 KYQ8NBH2 561 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 GATA6Q92908 595 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 HES6Q96HZ4 224 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 AGAP2Q99490 1192 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 FERMT1Q9BQL6 677 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 TMEM121BQ9BXQ6 578 aaPredicted RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 TEX101Q9BY14 249 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 GBA3Q9H227 469 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 CARS2Q9HA77 564 aaKnown RBP11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 CYP4F12Q9HCS2 524 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 LZTFL1Q9NQ48 299 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 PKD2L2Q9NZM6 624 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 SIRPGQ9P1W8 387 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 FAM153AQ9UHL3 310 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 SHOC2Q9UQ13 582 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 ZNF711Q9Y462 761 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 DGKBQ9Y6T7 804 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 U3KQA8 63 aa11.89□□□□□ -0.51
LSP1P3-201ENST00000449530 IGF2RP11717 2491 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 GOLGA6L3A6NEY3 463 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 PDE2AO00408 941 aaPredicted RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TPP1O14773 563 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TNFRSF10CO14798 259 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 INPP4BO15327 924 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 YY2O15391 372 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 KCNN4O15554 427 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 NRDCO43847 1150 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 STK10O94804 968 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TEAD1P28347 426 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 CHRNA4P43681 627 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 TNNT3P45378 269 aaPredicted RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 GNPDA1P46926 289 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SPINT3P49223 89 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 DUSP3P51452 185 aaPredicted RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ILKQ13418 452 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 NR0B2Q15466 257 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SMAD1Q15797 465 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SEL1L2Q5TEA6 688 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ITPRIPL1Q6GPH6 555 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 GUSBP11Q6P575 273 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 ADAMTSL4Q6UY14 1074 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 EFL1Q7Z2Z2 1120 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 GKN2Q86XP6 184 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC35F3Q8IY50 421 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 NRSN1Q8IZ57 195 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 SLC25A41Q8N5S1 370 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 IFI44Q8TCB0 444 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 CCHCR1Q8TD31 782 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 MRGPRX2Q96LB1 330 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 FCRL5Q96RD9 977 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 BOCQ9BWV1 1114 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
LSP1P3-201ENST00000449530 FRMD8Q9BZ67 464 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms