RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 ARL14EPQ8N8R7 260 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SMYD1Q8NB12 490 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 RNASE11Q8TAA1 199 aaKnown RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 QKIQ96PU8 341 aaKnown RBP eCLIP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 FAM83DQ9H4H8 585 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 POLMQ9NP87 494 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 PRDM8Q9NQV8 689 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 PLIN4Q96Q06 1357 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 IGLV3-22A0A075B6J6 115 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 PNMA8CA0A1B0GUJ8 204 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 LRATO95237 230 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 PRG2P13727 222 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SLC6A2P23975 617 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 ATP12AP54707 1039 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 CRHR2Q13324 411 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DGUOKQ16854 277 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TTC23Q5W5X9 447 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 ZNF57Q68EA5 555 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 NET1Q7Z628 596 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DEPDC4Q8N2C3 294 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SRFBP1Q8NEF9 429 aaKnown RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DBF4BQ8NFT6 615 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 FAXDC2Q96IV6 333 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TNKS2Q9H2K2 1166 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 UBR1Q8IWV7 1749 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 MGRN1O60291 552 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 COL6A2P12110 1019 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 CCNA2P20248 432 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 BUD31P41223 144 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 FPGSQ05932 587 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TRAF3Q13114 568 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 NR1D2Q14995 579 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 LINGO4Q6UY18 593 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TMPRSS11BQ86T26 416 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 HERVK_113Q902F9 699 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 PRCCQ92733 491 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 CDH19Q9H159 772 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DPEP3Q9H4B8 488 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 POLR3HQ9Y535 204 aaPredicted RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 H0YC42 278 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 WWP2O00308 870 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DGKGP49619 791 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 CACNA2D1P54289 1103 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 LAPTM5Q13571 262 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 ATP13A5Q4VNC0 1218 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TTMPQ5BVD1 217 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 RNASEH2BQ5TBB1 312 aaKnown RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SPATA19Q7Z5L4 167 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 TAF8Q7Z7C8 310 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 DENND6AQ8IWF6 608 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 NMD3Q96D46 503 aaKnown RBP10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SLC25A51Q9H1U9 297 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 IKZF4Q9H2S9 585 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 SLC45A1Q9Y2W3 748 aa10.18□□□□□ -0.78
SCN10A-201ENST00000449082 A0A087WXM4 84 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 INSIG1O15503 277 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ITGAXP20702 1163 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ITPKAP23677 461 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CMPK1P30085 196 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ACLYP53396 1101 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ILF3Q12906 894 aaKnown RBP eCLIP10.17□□□□□ -0.78
SCN10A-201ENST00000449082 MAGEE2Q8TD90 523 aaPredicted RBP10.17□□□□□ -0.78
SCN10A-201ENST00000449082 TRAF6Q9Y4K3 522 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 MATN3O15232 486 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SLC22A3O75751 556 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SERPINA6P08185 405 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 PBX3P40426 434 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 GPD2P43304 727 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SEC13P55735 322 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CCDC92Q53HC0 331 aaPredicted RBP10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CPTPQ5TA50 214 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ANKS1BQ7Z6G8 1248 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 PLD5Q8N7P1 536 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 METTL21AQ8WXB1 218 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 TRAPPC9Q96Q05 1148 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 FGFBP2Q9BYJ0 223 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 GPR88Q9GZN0 384 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CAB39LQ9H9S4 337 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 ARHGEF3Q9NR81 526 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 LRCH1Q9Y2L9 728 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SCN2BO60939 215 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 PSMG1O95456 288 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 LGALS3BPQ08380 585 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 RALGDSQ12967 914 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 TPGS2Q68CL5 300 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 TAC4Q86UU9 113 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 PROSER1Q86XN7 944 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 C3orf18Q9UK00 162 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 MCIDASD6RGH6 385 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 TRAFD1O14545 582 aaPredicted RBP10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SNX3O60493 162 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CAPN1P07384 714 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SLC25A3Q00325 362 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 SPIBQ01892 262 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 BNC1Q01954 994 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 DSC2Q02487 901 aa10.17□□□□□ -0.78
SCN10A-201ENST00000449082 C9orf64Q5T6V5 341 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms